RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 KIF19Q2TAC6 998 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 KCTD21Q4G0X4 260 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 CASP10Q92851 521 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 FATE1Q969F0 183 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 BIRC8Q96P09 236 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 PKMYT1Q99640 499 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 AKTIPQ9H8T0 292 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 TMLHEQ9NVH6 421 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 TUBA8Q9NY65 449 aaPredicted RBP20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 MPP6Q9NZW5 540 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 GIT1Q9Y2X7 761 aa20.14■□□□□ 0.82
SYNGAP1-227ENST00000638142 hCG_2014768A0A024R1R8 64 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 MROH6A6NGR9 719 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 FGF4P08620 206 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 HOXC8P31273 242 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 KCNC1P48547 511 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 SCNN1GP51170 649 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 INPP5AQ14642 412 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 LPIN1Q14693 890 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 CAMK1DQ8IU85 385 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 FAM47BQ8NA70 645 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 OR6P1Q8NGX9 317 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 TMIGD2Q96BF3 282 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 PAAF1Q9BRP4 392 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 HS3ST4Q9Y661 456 aa20.14■□□□□ 0.81
SYNGAP1-227ENST00000638142 NME4O00746 187 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 CYP11A1P05108 521 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 HSD17B1P14061 328 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 NELFEP18615 380 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 TSPAN8P19075 237 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 NDST2P52849 883 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 PRAMEP78395 509 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 BNIP2Q12982 314 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 TAF2Q6P1X5 1199 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 MINDY1Q8N5J2 469 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 LPPQ93052 612 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 NT5MQ9NPB1 228 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 MAP10Q9P2G4 905 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 PTBP2Q9UKA9 531 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 DNAJC15Q9Y5T4 150 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 MIA3Q5JRA6 1907 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 PLOD2O00469 737 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 NR5A2O00482 541 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 CD86P42081 329 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 MAPRE1Q15691 268 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 PITRM1Q5JRX3 1037 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 TBCELQ5QJ74 424 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 KLHL23Q8NBE8 558 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 GRIN3AQ8TCU5 1115 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 NOL6Q9H6R4 1146 aaKnown RBP20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 RHBDL2Q9NX52 303 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 ST3GAL5Q9UNP4 418 aa20.13■□□□□ 0.81
SYNGAP1-227ENST00000638142 DHRS12A0PJE2 317 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 TRIM64CA6NLI5 447 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 NME5P56597 212 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SH3BP2P78314 561 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 LCN8Q6JVE9 175 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 DHRS4L2Q6PKH6 230 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 C14orf80Q86SX3 495 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 MIER2Q8N344 545 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 TNIP2Q8NFZ5 429 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 HDAC10Q969S8 669 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 PTERQ96BW5 349 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SLC45A3Q96JT2 553 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 RGS18Q9NS28 235 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 A0A087WXM4 84 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 M0QZ92 97 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 ANGPT2O15123 496 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 MOCS2O96007 188 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 HOXB8P17481 243 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 IL10P22301 178 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SCNN1BP51168 640 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 GALK1P51570 392 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SLC5A3P53794 718 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 MLLT6P55198 1093 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 MRPS6P82932 125 aaKnown RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 FAM110CQ1W6H9 321 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SPATS1Q496A3 300 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 RAB44Q7Z6P3 723 aaPredicted RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 UMODL1-AS1Q8N2C9 162 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 BRI3BPQ8WY22 251 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 C1orf74Q96LT6 269 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 SPON1Q9HCB6 807 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 GMPR2Q9P2T1 348 aaKnown RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 DSEQ9UL01 958 aa20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
SYNGAP1-227ENST00000638142 CDK14O94921 469 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 CD1DP15813 335 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 FDXRP22570 491 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 PSMA4P25789 261 aaKnown RBP20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 ARSDP51689 593 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 ITKQ08881 620 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 MARC1Q5VT66 337 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 AGMOQ6ZNB7 445 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 LDB1Q86U70 411 aaPredicted RBP20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 PIM3Q86V86 326 aa20.11■□□□□ 0.81
SYNGAP1-227ENST00000638142 SLC15A3Q8IY34 581 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms