RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 NOP2P46087 812 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 TCEAL1Q15170 157 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 KCTD16Q68DU8 428 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 HSD11B1LQ7Z5J1 315 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 TSPAN33Q86UF1 283 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 VSIG1Q86XK7 387 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 RFX6Q8HWS3 928 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 SLC35F3Q8IY50 421 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 CACTIN-AS1Q8N1I8 211 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 PELI3Q8N2H9 469 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 DCBLD1Q8N8Z6 715 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 PIH1D2Q8WWB5 315 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 SCG3Q8WXD2 468 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 OR1E3Q8WZA6 343 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 DTD2Q96FN9 168 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 LGMNQ99538 433 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 RBSNQ9H1K0 784 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 FGF22Q9HCT0 170 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 KCTD5Q9NXV2 234 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 DDX56Q9NY93 547 aaKnown RBP16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 GOLGA6AQ9NYA3 693 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 SIRPGQ9P1W8 387 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 CHKBQ9Y259 395 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 RAXQ9Y2V3 346 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 AK5Q9Y6K8 562 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 CHD6Q8TD26 2715 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 EME2A4GXA9 379 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 KCNK1O00180 336 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 PSMD11O00231 422 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 FZD6O60353 706 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 JCHAINP01591 159 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 HOXC4P09017 264 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 COMTP21964 271 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 TRIM23P36406 574 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 ZNF75DP51815 510 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 DYNLT1P63172 113 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 PPIDQ08752 370 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 NIPAL4Q0D2K0 466 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 SLC9A4Q6AI14 798 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 NPNTQ6UXI9 565 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 Q6ZVL8 140 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 GKN2Q86XP6 184 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 ARRDC2Q8TBH0 407 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 SMIM14Q96QK8 99 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 LGR4Q9BXB1 951 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 TDRD1Q9BXT4 1180 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 MRPL40Q9NQ50 206 aaKnown RBP16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 GULP1Q9UBP9 304 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 MOSPD1Q9UJG1 213 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 PPIL1Q9Y3C6 166 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 CFAP47Q6ZTR5 3102 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 ASXL3Q9C0F0 2248 aa16.76■□□□□ 0.27
CACNA1A-259ENST00000638114 DSPP15924 2871 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 A0A0J9YYE9 177 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 A0A0U1RQS6 177 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 PDE2AO00408 941 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 TRBC1P01850 177 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 ZFXP17010 805 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CYLC1P35663 651 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 AP1B1Q10567 949 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 ZBTB17Q13105 803 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 IHHQ14623 411 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 PDK1Q15118 436 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 SPA17Q15506 151 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CDCP2Q5VXM1 449 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 LRRC66Q68CR7 880 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 RAET1GQ6H3X3 334 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 LVRNQ6Q4G3 990 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CRTC1Q6UUV9 634 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 HEATR4Q86WZ0 1026 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CCDC170Q8IYT3 715 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CBARPQ8N350 705 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 SDR16C5Q8N3Y7 309 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 LPCAT1Q8NF37 534 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 NAT6Q93015 286 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 DEPDC7Q96QD5 511 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 RBM15Q96T37 977 aaKnown RBP eCLIP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 NRSN2Q9GZP1 204 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CYP4F12Q9HCS2 524 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 PHPT1Q9NRX4 125 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 PADI4Q9UM07 663 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 GPR34Q9UPC5 381 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 DGKBQ9Y6T7 804 aa16.75■□□□□ 0.27
CACNA1A-259ENST00000638114 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 TNFRSF10CO14798 259 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 PPP1R12AO14974 1030 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 LCA5LO95447 670 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 MYCLP1P12525 358 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 TGM2P21980 687 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 CD86P42081 329 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 HADHBP55084 474 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 IFI35P80217 286 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 RTP5Q14D33 572 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 PERM1Q5SV97 790 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 MFSD7Q6UXD7 560 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 ARL10Q8N8L6 244 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 KYQ8NBH2 561 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
CACNA1A-259ENST00000638114 CEP41Q9BYV8 373 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms