RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RECQL5O94762 991 aaPredicted RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 TMEM253P0C7T8 217 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 MYBL1P10243 752 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 H2AFXP16104 143 aaPredicted RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 MCM3P25205 808 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 TRIM23P36406 574 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 SCNN1BP51168 640 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 HK3P52790 923 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 YPEL5P62699 121 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 SKOR1P84550 965 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 DPYSL3Q14195 570 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 LBRQ14739 615 aaKnown RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 CNGA3Q16281 694 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 BOLA3Q53S33 107 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 PRRT3Q5FWE3 981 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 CCDC70Q6NSX1 233 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 DPPA4Q7L190 304 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 ZNF572Q7Z3I7 529 aaPredicted RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 TMPRSS9Q7Z410 1059 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 HSD11B1LQ7Z5J1 315 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 TSPAN33Q86UF1 283 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 NRROSQ86YC3 692 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 SYCE1Q8N0S2 351 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 FAM174AQ8TBP5 190 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 IFI44Q8TCB0 444 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 CXorf40AQ8TE69 158 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 TEKT4Q8WW24 435 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 PIH1D2Q8WWB5 315 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 CTNNBL1Q8WYA6 563 aaPredicted RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 HSPH1Q92598 858 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 FAF2Q96CS3 445 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 HIC2Q96JB3 615 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 TUBGCP5Q96RT8 1024 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 ASCL3Q9NQ33 180 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 B4GALT6Q9UBX8 382 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 APOBEC3BQ9UH17 382 aaKnown RBP7.87□□□□□ -1.15
PNKP-229ENST00000637897 SALL4Q9UJQ4 1053 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 SSUH2Q9Y2M2 353 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 ENTPD2Q9Y5L3 495 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 UNC79Q9P2D8 2635 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 SCN8AQ9UQD0 1980 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 BSNQ9UPA5 3926 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ANKRD62A6NC57 917 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 NPIPB15A6NHN6 443 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 C3orf70A6NLC5 250 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 NTN3O00634 580 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 CES2O00748 559 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 NOBOXO60393 691 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 RNF8O76064 485 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 MPOP05164 745 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PCCBP05166 539 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 GP1BAP07359 652 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 MMP2P08253 660 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 CDK4P11802 303 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PAFAH1B1P43034 410 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 PEX5P50542 639 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 DAB2P98082 770 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 GBE1Q04446 702 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 NIPAL4Q0D2K0 466 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PIGHQ14442 188 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 RFTN1Q14699 578 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 NFATC4Q14934 902 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 LRRC14Q15048 493 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ISXQ2M1V0 245 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 C6orf132Q5T0Z8 1188 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 TMCO4Q5TGY1 634 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 MEI1Q5TIA1 1274 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ALG1LQ6GMV1 187 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PPP1R2P3Q6NXS1 205 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ZCCHC8Q6NZY4 707 aaKnown RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 BRAT1Q6PJG6 821 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ENPP7Q6UWV6 458 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 EFL1Q7Z2Z2 1120 aaKnown RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 TECPR1Q7Z6L1 1165 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 RHOT2Q8IXI1 618 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 KYQ8NBH2 561 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 SNIP1Q8TAD8 396 aaKnown RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 ARRDC2Q8TBH0 407 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 RAPGEF5Q92565 580 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 MAML1Q92585 1016 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 TBATAQ96M53 351 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 MCCC1Q96RQ3 725 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 NUDCD1Q96RS6 583 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 OSBPL9Q96SU4 736 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 AGAP2Q99490 1192 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 CINPQ9BW66 212 aaPredicted RBP7.86□□□□□ -1.15
PNKP-229ENST00000637897 TLR10Q9BXR5 811 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PRORYQ9H606 182 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 SP110Q9HB58 689 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ANAPC7Q9UJX3 599 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 PPIL1Q9Y3C6 166 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 SCINQ9Y6U3 715 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 ATMQ13315 3056 aa7.86□□□□□ -1.15
PNKP-229ENST00000637897 FLNBO75369 2602 aaKnown RBP7.85□□□□□ -1.15
PNKP-229ENST00000637897 CPED1A4D0V7 1026 aa7.85□□□□□ -1.15
PNKP-229ENST00000637897 GRID2IPA4D2P6 1211 aa7.85□□□□□ -1.15
PNKP-229ENST00000637897 CCDC151A5D8V7 595 aa7.85□□□□□ -1.15
PNKP-229ENST00000637897 CFAP69A5D8W1 941 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms