RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CRY2Q49AN0 593 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CFAP157Q5JU67 520 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MIIPQ5JXC2 388 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RARS2Q5T160 578 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 EEF1A1P5Q5VTE0 462 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NAA35Q5VZE5 725 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 AFMIDQ63HM1 303 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 DCAF15Q66K64 600 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 PTRHD1Q6GMV3 140 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CEP85Q6P2H3 762 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TPGS1Q6ZTW0 290 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 C1orf186Q6ZWK4 172 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ERN2Q76MJ5 926 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 ASPGQ86U10 573 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 AKAP14Q86UN6 197 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RHPN2Q8IUC4 686 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CDKL3Q8IVW4 592 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 MAPKAPK5Q8IW41 473 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CRYBG2Q8N1P7 616 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 POC5Q8NA72 575 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KYQ8NBH2 561 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ADCY4Q8NFM4 1077 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 OR52E1Q8NGJ3 308 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 OR14C36Q8NHC7 312 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 B4GALNT2Q8NHY0 566 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 Q8TCH9 128 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CCDC12Q8WUD4 166 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CHURC1Q8WUH1 139 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SCFD1Q8WVM8 642 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ASZ1Q8WWH4 475 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SLAMF9Q96A28 289 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 AZIN2Q96A70 460 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ISG20Q96AZ6 181 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 EAF2Q96CJ1 260 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 MTFMTQ96DP5 389 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CCDC51Q96ER9 411 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ZNF503Q96F45 646 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 LRRC46Q96FV0 321 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CHMP6Q96FZ7 201 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SLC35A4Q96G79 324 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ZDHHC12Q96GR4 267 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 RCC1LQ96I51 464 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 LCORQ96JN0 433 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 CCDC140Q96MF4 163 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 FAM20AQ96MK3 541 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CFAP57Q96MR6 1250 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SPATA13Q96N96 652 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TRAPPC9Q96Q05 1148 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SIN3AQ96ST3 1273 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CYTH2Q99418 400 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MMP19Q99542 508 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SELENOSQ9BQE4 189 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MGME1Q9BQP7 344 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 AIFM2Q9BRQ8 373 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 PIMREGQ9BSJ6 248 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TPPP3Q9BW30 176 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 BOCQ9BWV1 1114 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MKRN2Q9H000 416 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 TMEM117Q9H0C3 514 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 NKX2-4Q9H2Z4 354 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 EVA1AQ9H8M9 152 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 IL21RQ9HBE5 538 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 EPB41L5Q9HCM4 733 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TUFT1Q9NNX1 390 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 IL26Q9NPH9 171 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 G6PC2Q9NQR9 355 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 KCNH7Q9NS40 1196 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 FAM212BQ9NTI7 297 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 SACM1LQ9NTJ5 587 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.04□□□□□ -1.92
VIM-210ENST00000637053 SENP1Q9P0U3 644 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 LARSQ9P2J5 1176 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 THEGQ9P2T0 379 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 DBF4Q9UBU7 674 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 LPAR3Q9UBY5 353 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ARMCX3Q9UH62 379 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 LEF1Q9UJU2 399 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 DNPEPQ9ULA0 475 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 CDH7Q9ULB5 785 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 TTC7AQ9ULT0 858 aaPredicted RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 GABRQQ9UN88 632 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SLC22A14Q9Y267 594 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 ZNF510Q9Y2H8 683 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MTO1Q9Y2Z2 717 aaKnown RBP3.04□□□□□ -1.92
VIM-210ENST00000637053 PCDHA10Q9Y5I2 948 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 U3KQV3 271 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 SCRIBQ14160 1630 aa3.04□□□□□ -1.92
VIM-210ENST00000637053 MAPK8IP3Q9UPT6 1336 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 LOC105371267A0A1B0GV96 52 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 FAM230AA0A1W2PPH8 454 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 GOLGA6L10A6NI86 522 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 IQCF5A8MTL0 148 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 MYO1GB0I1T2 1018 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 PRR23D1E9PI22 279 aaPredicted RBP3.03□□□□□ -1.92
VIM-210ENST00000637053 F8WDY8 70 aa3.03□□□□□ -1.92
VIM-210ENST00000637053 H3BUI4 141 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms