RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CXCL11O14625 94 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ZNF263O14978 683 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CASC3O15234 703 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TP73O15350 636 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SPRY2O43597 315 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 DNPH1O43598 174 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 BUB1O43683 1085 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ZC3H11AO75152 810 aaKnown RBP eCLIP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ENTPD3O75355 529 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PMPCBO75439 489 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 WDR47O94967 919 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 REC8O95072 547 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GGPS1O95749 300 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FTCDO95954 541 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ITGA2BP08514 1039 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 VIMP08670 466 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 HMOX1P09601 288 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ELFN1P0C7U0 828 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RSPH10BP0C881 870 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TROVE2P10155 538 aaKnown RBP eCLIP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 HPGDP15428 266 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GALP22466 123 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GKP32189 559 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 OR1G1P47890 313 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PITPNBP48739 271 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CAMLGP49069 296 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CDK7P50613 346 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 HSD17B4P51659 736 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PRKAA2P54646 552 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ALDH18A1P54886 795 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PSMC6P62333 389 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 YPEL5P62699 121 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PPATQ06203 517 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TNFAIP1Q13829 316 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 HNRNPDQ14103 355 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GIT2Q14161 759 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 KCNJ12Q14500 433 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SQLEQ14534 574 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GRM4Q14833 912 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MEP1BQ16820 701 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 AASDHQ4L235 1098 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ZNF628Q5EBL2 1059 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PLEKHS1Q5SXH7 462 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 AKNAD1Q5T1N1 836 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TREML2Q5T2D2 321 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TTC22Q5TAA0 569 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ATG16L1Q676U5 607 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ADALQ6DHV7 355 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 OR7E24Q6IFN5 339 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 GRHL2Q6ISB3 625 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 C8orf74Q6P047 294 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MSANTD2Q6P1R3 559 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CYP20A1Q6UW02 462 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 C6orf89Q6UWU4 347 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CLEC9AQ6UXN8 241 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PIK3AP1Q6ZUJ8 805 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MARK2Q7KZI7 788 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 OTOAQ7RTW8 1153 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ANKS1BQ7Z6G8 1248 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TLK2Q86UE8 772 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SRRM1Q8IYB3 904 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 C17orf53Q8N3J3 647 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FAM133AQ8N9E0 248 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 POMGNT2Q8NAT1 580 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 KCNH5Q8NCM2 988 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SCAMP5Q8TAC9 235 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CCDC110Q8TBZ0 833 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MIPOL1Q8TD10 442 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 BCAS4Q8TDM0 211 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SLC22A17Q8WUG5 538 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 IP6K1Q92551 441 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 MR1Q95460 341 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 NCLNQ969V3 563 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RMDN1Q96DB5 314 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 DTNBP1Q96EV8 351 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 EDC3Q96F86 508 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PIWIL1Q96J94 861 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PDLIM2Q96JY6 352 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ART5Q96L15 291 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FER1L6-AS2Q96M78 137 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TTC25Q96NG3 672 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FAM111AQ96PZ2 611 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 CTAGE1Q96RT6 745 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 PRR25Q96S07 402 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FAM118BQ9BPY3 351 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 ERP44Q9BS26 406 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RTKNQ9BST9 563 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 THAP7Q9BT49 309 aaPredicted RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TEX12Q9BXU0 123 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TRIM2Q9C040 744 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 USP44Q9H0E7 712 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 DPH5Q9H2P9 285 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 STN1Q9H668 368 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RPRD1BQ9NQG5 326 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 SERTAD4Q9NUC0 356 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TMEM184CQ9NVA4 438 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 DDX43Q9NXZ2 648 aaKnown RBP3.02□□□□□ -1.93
PSPC1-208ENST00000635562 NDUFAF4Q9P032 175 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 FOXJ2Q9P0K8 574 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms