RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZCCHC9Q8N567 271 aaKnown RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 CAMKK1Q8N5S9 505 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 SCRN2Q96FV2 425 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 FRMD8Q9BZ67 464 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 TPSD1Q9BZJ3 242 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 ROPN1BQ9BZX4 212 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 ROPN1Q9HAT0 212 aaPredicted RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 B4GALT6Q9UBX8 382 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 MTRF1LQ9UGC7 380 aaKnown RBP14.48□□□□□ -0.09
LINC00339-208ENST00000634934 ITM2BQ9Y287 266 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 ANKRD36A6QL64 1941 aa14.48□□□□□ -0.09
LINC00339-208ENST00000634934 A0A0U1RQS6 177 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 CAPN8A6NHC0 703 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 NPIPB15A6NHN6 443 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-208ENST00000634934 H0Y858 1186 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 LAMTOR5O43504 91 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 SLC4A1P02730 911 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 CYP2A6P11509 494 aaPredicted RBP14.47□□□□□ -0.09
LINC00339-208ENST00000634934 MLNP12872 115 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 MGAT1P26572 445 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 NPY2RP49146 381 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 TPMTP51580 245 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 GUCY1A3Q02108 690 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 SEPT6Q14141 434 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 ANGPT1Q15389 498 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 HIF1AQ16665 826 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 BBS9Q3SYG4 887 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 FNBP1LQ5T0N5 605 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 AGBL4Q5VU57 503 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 MAMSTRQ6ZN01 415 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 USP30Q70CQ3 517 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 KBTBD6Q86V97 674 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 PACS2Q86VP3 889 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 CCDC25Q86WR0 208 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 RAB7BQ96AH8 199 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 EPB41L4BQ9H329 900 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 CD93Q9NPY3 652 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 EBF1Q9UH73 591 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 CYP8B1Q9UNU6 501 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 PPIL1Q9Y3C6 166 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 SPO11Q9Y5K1 396 aa14.47□□□□□ -0.09
LINC00339-208ENST00000634934 C1orf232A0A0U1RR37 186 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 K7ESF4 209 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 BANF1O75531 89 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 ATP1A2P50993 1020 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 SUOXP51687 545 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 CRADDP78560 199 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 ELP6Q0PNE2 266 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 MSS51Q4VC12 460 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 CCDC38Q502W7 563 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 LACTB2Q53H82 288 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-208ENST00000634934 SWT1Q5T5J6 900 aaKnown RBP14.46□□□□□ -0.09
LINC00339-208ENST00000634934 CASC4Q6P4E1 433 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 GLT6D1Q7Z4J2 308 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 RASSF3Q86WH2 238 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 OTUD6BQ8N6M0 293 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 UBLCP1Q8WVY7 318 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-208ENST00000634934 MCCC1Q96RQ3 725 aaPredicted RBP14.46□□□□□ -0.09
LINC00339-208ENST00000634934 GPR63Q9BZJ6 419 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 MAGEE1Q9HCI5 957 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 ITM2CQ9NQX7 267 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 GGT7Q9UJ14 662 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 FZD4Q9ULV1 537 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 HCN4Q9Y3Q4 1203 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 ZNF711Q9Y462 761 aa14.46□□□□□ -0.09
LINC00339-208ENST00000634934 PRR23AA6NEV1 266 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 FAM47DPA6NHR8 397 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 SDR42E2A6NKP2 422 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 AREL1O15033 823 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 SLC7A4O43246 635 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 PAPSS2O95340 614 aaPredicted RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 C7P10643 843 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 VIPR1P32241 457 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 MMP12P39900 470 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 PMS2P54278 862 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 ARHGEF7Q14155 803 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 HP1BP3Q5SSJ5 553 aaPredicted RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 CRTC1Q6UUV9 634 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 CENPUQ71F23 418 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 TRMT10CQ7L0Y3 403 aaKnown RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 DPPA4Q7L190 304 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 LYSMD3Q7Z3D4 306 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 MPP5Q8N3R9 675 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 RLN3Q8WXF3 142 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 SRPK1Q96SB4 655 aaKnown RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 WRAP53Q9BUR4 548 aaKnown RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 IL22Q9GZX6 179 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 SYBUQ9NX95 663 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 HACD3Q9P035 362 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 SAMD15Q9P1V8 674 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 USP36Q9P275 1121 aaKnown RBP14.46□□□□□ -0.1
LINC00339-208ENST00000634934 FADS3Q9Y5Q0 445 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 MAD1L1Q9Y6D9 718 aa14.46□□□□□ -0.1
LINC00339-208ENST00000634934 CCDC78A2IDD5 438 aa14.45□□□□□ -0.1
LINC00339-208ENST00000634934 GOLGA8CPA6NN73 597 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms