RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 MECP2P51608 486 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 NBPF12Q5TAG4 269 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 POU5F2Q8N7G0 328 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 SLC15A5A6NIM6 579 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 TFPIP10646 304 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ADORA2AP29274 412 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RPP38P78345 283 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PCID2Q5JVF3 399 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ABCA11PQ4W5N1 156 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 NEPROQ6NW34 567 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 C10orf107Q8IVU9 208 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 AGO4Q9HCK5 861 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 GGA2Q9UJY4 613 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 USP17L7P0C7H9 530 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 DNASE1L1P49184 302 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 LIPMQ5VYY2 423 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZNF615Q8N8J6 731 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 CDYL2Q8N8U2 506 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 FBXO30Q8TB52 745 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RTFDC1Q9BY42 306 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 IL18R1Q13478 541 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 MFSD10Q14728 455 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PTF1AQ7RTS3 328 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RAB43Q86YS6 212 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 MAGEL2Q9UJ55 1249 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 UBR1Q8IWV7 1749 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PLCZ1Q86YW0 608 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 CCDC107Q8WV48 283 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ANKZF1Q9H8Y5 726 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 IL1RAPQ9NPH3 570 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 HCN3Q9P1Z3 774 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 H3BRB1 525 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 HGFP14210 728 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 IRF8Q02556 426 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 CBX2Q14781 532 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 BORCS5Q969J3 196 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 EHD1Q9H4M9 534 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PCDHGB5Q9Y5G0 923 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ITGAVP06756 1048 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZNF697Q5TEC3 545 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 SLC30A8Q8IWU4 369 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PRICKLE1Q96MT3 831 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 RHBGQ9H310 441 aa13.2□□□□□ -0.3
SYNGAP1-208ENST00000629380 PRMT5O14744 637 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 NUAK1O60285 661 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 MAP3K6O95382 1288 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ARL3P36405 182 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CEBPGP53567 150 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ADAM8P78325 824 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PPP2R2BQ00005 443 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 EFR3AQ14156 821 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 GRHL2Q6ISB3 625 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ZNF221Q9UK13 617 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 DIDO1Q9BTC0 2240 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PSMA1P25786 263 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PRKG2Q13237 762 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 SLC27A1Q6PCB7 646 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CNSTQ6PJW8 725 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PIWIL4Q7Z3Z4 852 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 EDEM1Q92611 657 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ASB7Q9H672 318 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ERMAPQ96PL5 475 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 IDI2Q9BXS1 227 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CA12O43570 354 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CLCN3P51790 818 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 ATP6V0D1P61421 351 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 LARS2Q15031 903 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PDK3Q15120 406 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 PIK3R6Q5UE93 754 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 C12orf56Q8IXR9 622 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 SYTL5Q8TDW5 730 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 OR52E6Q96RD3 313 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 CHMP1AQ9HD42 196 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 FAM172BPA6NC97 362 aa13.19□□□□□ -0.3
SYNGAP1-208ENST00000629380 TSHRP16473 764 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms