RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CRTC1Q6UUV9 634 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 PTAR1Q7Z6K3 402 aaPredicted RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 TECPR1Q7Z6L1 1165 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 ZC3H18Q86VM9 953 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 GATAD2AQ86YP4 633 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 CCDC50Q8IVM0 306 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDX41-219ENST00000629036 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 TFB1MQ8WVM0 346 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 EID2BQ96D98 161 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 DTD2Q96FN9 168 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 IFT43Q96FT9 208 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 OXNAD1Q96HP4 312 aaPredicted RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 WDR24Q96S15 920 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 RBM15Q96T37 977 aaKnown RBP eCLIP11.13□□□□□ -0.633e-7■□□□□ 10.7
DDX41-219ENST00000629036 FAM118BQ9BPY3 351 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 MAK16Q9BXY0 300 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 TSGA10Q9BZW7 698 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 SLC25A51Q9H1U9 297 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 USP29Q9HBJ7 922 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 GLOD4Q9HC38 313 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 UCKL1Q9NWZ5 548 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 AMFRQ9UKV5 643 aa11.13□□□□□ -0.63
DDX41-219ENST00000629036 R3HDM2Q9Y2K5 976 aaKnown RBP11.13□□□□□ -0.63
DDX41-219ENST00000629036 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 APC2O95996 2303 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 A8MX80 341 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 HACD1B0YJ81 288 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 PSMD11O00231 422 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 FPGTO14772 594 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 MT-CYBP00156 380 aaPredicted RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 ATXN1LP0C7T5 689 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 ELFN1P0C7U0 828 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 NFKB1P19838 968 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 RBL1P28749 1068 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 TRIM23P36406 574 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 STC1P52823 247 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 RPL26P61254 145 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 POLR2LP62875 67 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 SGCGQ13326 291 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 LRRC14Q15048 493 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 COL28A1Q2UY09 1125 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 ESRP1Q6NXG1 681 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 MACC1Q6ZN28 852 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 SYCE1Q8N0S2 351 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 OXR1Q8N573 874 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 P3H4Q92791 437 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 TCEAL2Q9H3H9 227 aaPredicted RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 PCDH9Q9HC56 1237 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 GUCA1BQ9UMX6 200 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 RPL26L1Q9UNX3 145 aaKnown RBP11.12□□□□□ -0.63
DDX41-219ENST00000629036 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 TTLL3Q9Y4R7 772 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 NEUROG3Q9Y4Z2 214 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 U3KQA8 63 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
DDX41-219ENST00000629036 NAV2Q8IVL1 2488 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 EIF4E1BA6NMX2 242 aaKnown RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 TRIM38O00635 465 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 YKT6O15498 198 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 KRT86O43790 486 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 MAGEC1O60732 1142 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 SDC3O75056 442 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 PIAS2O75928 621 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 CSF2P04141 144 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 CCDC175P0C221 793 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 XPAP23025 273 aaPredicted RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 DGKAP23743 735 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 ETV3P41162 512 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 GRK6P43250 576 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 YPEL5P62699 121 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 PTSQ03393 145 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 ITKQ08881 620 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 MTM1Q13496 603 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 PDE1CQ14123 709 aaPredicted RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 ZNF542PQ5EBM4 170 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 CFAP58Q5T655 872 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 LRRC66Q68CR7 880 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 Q6ZVL8 140 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 BZW1Q7L1Q6 419 aaKnown RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 SLCO6A1Q86UG4 719 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 PARGQ86W56 976 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 DCP2Q8IU60 420 aaKnown RBP11.11□□□□□ -0.63
DDX41-219ENST00000629036 REXO1L1PQ8IX06 675 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 RBFAQ8N0V3 343 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 SLC35B2Q8TB61 432 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
DDX41-219ENST00000629036 SKA1Q96BD8 255 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms