RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 TRAFD1O14545 582 aaPredicted RBP18.99■□□□□ 0.63
SMN1-211ENST00000625245 B4GAT1O43505 415 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 MIPP30301 263 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 AP1S1P61966 158 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 B4GALNT1Q00973 533 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 SLC10A7Q0GE19 358 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 BIRC2Q13490 618 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 LBRQ14739 615 aaKnown RBP18.99■□□□□ 0.63
SMN1-211ENST00000625245 PLEKHA7Q6IQ23 1121 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 IRF2BP2Q7Z5L9 587 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 PIM3Q86V86 326 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 SLITRK4Q8IW52 837 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 TP53INP2Q8IXH6 220 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 ZSCAN1Q8NBB4 408 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 NUS1Q96E22 293 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 PCDHGC4Q9Y5F7 938 aa18.99■□□□□ 0.63
SMN1-211ENST00000625245 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.98■□□□□ 0.63
SMN1-211ENST00000625245 WISP1O95388 367 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 CPNE6O95741 557 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 MYCLP1P12525 358 aaPredicted RBP18.98■□□□□ 0.63
SMN1-211ENST00000625245 CCNB1P14635 433 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 GNPDA1P46926 289 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 ZNF235Q14590 738 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 C16orf72Q14CZ0 275 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 TMCO4Q5TGY1 634 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 PPP1R2P3Q6NXS1 205 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 HEATR4Q86WZ0 1026 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 GPBAR1Q8TDU6 330 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 ZDHHC1Q8WTX9 485 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 COQ10AQ96MF6 247 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 PSKH2Q96QS6 385 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 GSDMCQ9BYG8 508 aa18.98■□□□□ 0.63
SMN1-211ENST00000625245 CWC15Q9P013 229 aaKnown RBP18.98■□□□□ 0.63
SMN1-211ENST00000625245 TMEM191CA6NGB0 347 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 LRRC10BA6NIK2 292 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 C9orf172C9J069 976 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 CPP00450 1065 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 FGF1P05230 155 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 AK4P27144 223 aaPredicted RBP18.97■□□□□ 0.63
SMN1-211ENST00000625245 VIPR1P32241 457 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 ILF3Q12906 894 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMN1-211ENST00000625245 CNGA3Q16281 694 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 TMEM164Q5U3C3 297 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 JPH3Q8WXH2 748 aaPredicted RBP18.97■□□□□ 0.63
SMN1-211ENST00000625245 TRIM7Q9C029 511 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 TRIM4Q9C037 500 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 TAAR2Q9P1P5 351 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 PCDHGA4Q9Y5G9 962 aa18.97■□□□□ 0.63
SMN1-211ENST00000625245 A0A1W2PQC6 194 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 ZW10O43264 779 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 HEXIM1O94992 359 aaKnown RBP18.96■□□□□ 0.63
SMN1-211ENST00000625245 ECEL1O95672 775 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 FUCA1P04066 466 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 ITGB2P05107 769 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 CEACAM5P06731 702 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 FAM87AP0C7U9 286 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 CYP2A6P11509 494 aaPredicted RBP18.96■□□□□ 0.63
SMN1-211ENST00000625245 CCL4P13236 92 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 ETV3P41162 512 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 HCAR3P49019 387 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 CYP4F2P78329 520 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 NFKB2Q00653 900 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 STX1AQ16623 288 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 SLC30A9Q6PML9 568 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 XKR5Q6UX68 686 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 RBM43Q6ZSC3 357 aaKnown RBP18.96■□□□□ 0.63
SMN1-211ENST00000625245 CYP4V2Q6ZWL3 525 aaPredicted RBP18.96■□□□□ 0.63
SMN1-211ENST00000625245 NRROSQ86YC3 692 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 LZTR1Q8N653 840 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 RCBTB1Q8NDN9 531 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 ZNF599Q96NL3 588 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 NUDT22Q9BRQ3 303 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 SYT11Q9BT88 431 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 TEX101Q9BY14 249 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 ZWILCHQ9H900 591 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 CNOT8Q9UFF9 292 aaKnown RBP18.96■□□□□ 0.63
SMN1-211ENST00000625245 SUFUQ9UMX1 484 aa18.96■□□□□ 0.63
SMN1-211ENST00000625245 SDK2Q58EX2 2172 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 A0A1W2PQ67 120 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 H3BRJ5 948 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 HTRA2O43464 458 aaPredicted RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 FTLP02792 175 aaPredicted RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 WT1P19544 449 aaPredicted RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 AMPD1P23109 780 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 NFKBIAP25963 317 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 POLD2P49005 469 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 DPYSQ14117 519 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 ASIC2Q16515 512 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 RAET1GQ6H3X3 334 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 ZNF574Q6ZN55 896 aaPredicted RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 APTXQ7Z2E3 356 aaKnown RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 HSD11B1LQ7Z5J1 315 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 PSTKQ8IV42 348 aaKnown RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 PTCD2Q8WV60 388 aaKnown RBP18.95■□□□□ 0.62
SMN1-211ENST00000625245 PATE1Q8WXA2 126 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 NUDCD1Q96RS6 583 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 NOD2Q9HC29 1040 aa18.95■□□□□ 0.62
SMN1-211ENST00000625245 TRNAU1APQ9NX07 287 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms