RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 NEURL2Q9BR09 285 aa13.44□□□□□ -0.26
PCDHB17P-202ENST00000623466 DCUN1D5Q9BTE7 237 aa13.44□□□□□ -0.26
PCDHB17P-202ENST00000623466 SLC39A8Q9C0K1 460 aa13.44□□□□□ -0.26
PCDHB17P-202ENST00000623466 TNFRSF12AQ9NP84 129 aa13.44□□□□□ -0.26
PCDHB17P-202ENST00000623466 BCAP29Q9UHQ4 241 aa13.44□□□□□ -0.26
PCDHB17P-202ENST00000623466 PRORSD1PA6NEY8 169 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SCAMP3O14828 347 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TIMM44O43615 452 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TIPRLO75663 272 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 GJB3O75712 270 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SEC24DO94855 1032 aaPredicted RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TUSC3Q13454 348 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ANO4Q32M45 955 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ITPRIPL1Q6GPH6 555 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 HERC6Q8IVU3 1022 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CPSF7Q8N684 471 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 OLAHQ9NV23 265 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SLC2A6Q9UGQ3 507 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CARD8Q9Y2G2 431 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TRIM38O00635 465 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CA12O43570 354 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 IGHA2P01877 340 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 GNAO1P09471 354 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TSPAN8P19075 237 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 UGT1A6P19224 532 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ITKQ08881 620 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SPIDRQ14159 915 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TRIM25Q14258 630 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 AGKQ53H12 422 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 FAM171BQ6P995 826 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ZBTB46Q86UZ6 589 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 MFSD6LQ8IWD5 586 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 DDHD1Q8NEL9 900 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 HMGCLL1Q8TB92 370 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 DLG3Q92796 817 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SLCO4A1Q96BD0 722 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 DKK3Q9UBP4 350 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ATP6AP2A0A1C7CYW4 349 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SDHDO14521 159 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ATP6AP2O75787 350 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CABYRO75952 493 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 H6PDO95479 791 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 TSTD2Q5T7W7 516 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SMYD5Q6GMV2 418 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 LRRC8EQ6NSJ5 796 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CGREF1Q99674 301 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 SH3GL1Q99961 368 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CASS4Q9NQ75 786 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 RCOR3Q9P2K3 495 aaPredicted RBP13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 VPS28Q9UK41 221 aa13.43□□□□□ -0.26
PCDHB17P-202ENST00000623466 ZNF236Q9UL36 1845 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 TRIM64CA6NLI5 447 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 TPST1O60507 370 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 TADA2AO75478 443 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 FUCA1P04066 466 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 RPL9P32969 192 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 SOX11P35716 441 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 NME5P56597 212 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 TSPY1Q01534 308 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 CLLU1OSQ5K130 101 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 FAM47BQ8NA70 645 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 TXNDC5Q8NBS9 432 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 STYXQ8WUJ0 223 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 IL1RL2Q9HB29 575 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 FBXO9Q9UK97 447 aaPredicted RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 FAM149AA5PLN7 773 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 SAC3D1A6NKF1 404 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 ZNF23P17027 643 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 HSPA13P48723 471 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 EFEMP1Q12805 493 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 USP41Q3LFD5 358 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 HMBOX1Q6NT76 420 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 MRPL10Q7Z7H8 261 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 MAELQ96JY0 434 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 GPR22Q99680 433 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 PAIP1Q9H074 479 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 EBF1Q9UH73 591 aa13.42□□□□□ -0.26
PCDHB17P-202ENST00000623466 C9JVG2 144 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 CNTN5O94779 1100 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 CLIC3O95833 236 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 CDH3P22223 829 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 KCNA5P22460 613 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 FAM209AQ5JX71 171 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 ESRP1Q6NXG1 681 aaKnown RBP13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 POTEHQ6S545 545 aa13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 PDZD4Q76G19 769 aaPredicted RBP13.41□□□□□ -0.26
PCDHB17P-202ENST00000623466 TMEM126BQ8IUX1 230 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms