RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ITM2BQ9Y287 266 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 SDR42E2A6NKP2 422 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 NDUFS2O75306 463 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 ZNF30P17039 623 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 MGAT1P26572 445 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 POU6F1Q14863 301 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 DNAJC21Q5F1R6 531 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 PMS2CLQ68D20 193 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 WDR93Q6P2C0 686 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 NEK5Q6P3R8 708 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 LPCAT2Q7L5N7 544 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TSPAN33Q86UF1 283 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 ALYREFQ86V81 257 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TTC30BQ8N4P2 665 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 DEFB119Q8N690 84 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 OR14C36Q8NHC7 312 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 PTCD2Q8WV60 388 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 SIGLEC10Q96LC7 697 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 PREBQ9HCU5 417 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 WSB2Q9NYS7 404 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 MTRF1LQ9UGC7 380 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 GGT7Q9UJ14 662 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 NFU1Q9UMS0 254 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 CEP192Q8TEP8 1941 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 SDK1Q7Z5N4 2213 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 GPR179Q6PRD1 2367 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 C1orf232A0A0U1RR37 186 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 NEMP1O14524 444 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 EIF3HO15372 352 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 CRTAMO95727 393 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 ADRA1DP25100 572 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 SEMG2Q02383 582 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 MTM1Q13496 603 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 LAMB3Q13751 1172 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 ARHGEF7Q14155 803 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 TAF1AQ15573 450 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 CNGA3Q16281 694 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 MSS51Q4VC12 460 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 PCID2Q5JVF3 399 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 LRRC66Q68CR7 880 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 LYSMD3Q7Z3D4 306 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 GLT6D1Q7Z4J2 308 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 TMC3Q7Z5M5 1100 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 AGGF1Q8N302 714 aaeCLIP19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 CBARPQ8N350 705 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 LRRC39Q96DD0 335 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 FMO2Q99518 471 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 TSPYL1Q9H0U9 437 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 ZFYVE1Q9HBF4 777 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 SYBUQ9NX95 663 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 GMEB2Q9UKD1 530 aa19.85■□□□□ 0.77
PDLIM2-221ENST00000622702 HEATR9A2RTY3 570 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 A8MX80 341 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 C10orf142B7Z368 130 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 PSMD11O00231 422 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 AURKAO14965 403 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 LDB2O43679 373 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 TUBBP07437 444 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 RETP07949 1114 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 ACSL1P33121 698 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 HMGCLP35914 325 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 DHPSP49366 369 aaPredicted RBP19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 PDE1BQ01064 536 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 DHX9Q08211 1270 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 BBS9Q3SYG4 887 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 LIPIQ6XZB0 460 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 CENPUQ71F23 418 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 ARMCX6Q7L4S7 300 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 RAVER1Q8IY67 606 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 OR2T34Q8NGX1 318 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.84■□□□□ 0.774e-7■■■■■ 58.1
PDLIM2-221ENST00000622702 LOXL4Q96JB6 756 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 C19orf43Q9BQ61 176 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 GPR174Q9BXC1 333 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 GPR63Q9BZJ6 419 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 MRM3Q9HC36 420 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 TCAF1Q9Y4C2 921 aa19.84■□□□□ 0.77
PDLIM2-221ENST00000622702 MAGEB16A2A368 324 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 MROH6A6NGR9 719 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 LRRC72A6NJI9 287 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 C2orf81A6NN90 581 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 CLDN7O95471 211 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 MCM3P25205 808 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 LIG3P49916 1009 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 STC1P52823 247 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 CRADDP78560 199 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 PTSQ03393 145 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 DENND2CQ68D51 928 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 KIAA1161Q6NSJ0 714 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 CCNI2Q6ZMN8 369 aaPredicted RBP19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 CEP128Q6ZU80 1094 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 MPP5Q8N3R9 675 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 DCLK2Q8N568 766 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 PPHLN1Q8NEY8 458 aaKnown RBP19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 CXorf40AQ8TE69 158 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 PEX13Q92968 403 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 EID2BQ96D98 161 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 KIFC1Q9BW19 673 aa19.83■□□□□ 0.76
PDLIM2-221ENST00000622702 RIMKLBQ9ULI2 386 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms