RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 HFE2Q6ZVN8 426 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 STRA8Q7Z7C7 330 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ZNF420Q8TAQ5 688 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 RASSF5Q8WWW0 418 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 CPNE1Q99829 537 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 NAT9Q9BTE0 207 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 STN1Q9H668 368 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 CAB39LQ9H9S4 337 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 GIMAP4Q9NUV9 329 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 DNAJC28Q9NX36 388 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 KLHL8Q9P2G9 620 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 MYRFQ9Y2G1 1151 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 UGT2A1Q9Y4X1 527 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 GPR32O75388 356 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 SNAI1O95863 264 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 MX2P20592 715 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 DCKP27707 260 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 GARSP41250 739 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 SOX4Q06945 474 aaPredicted RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 POU6F1Q14863 301 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 DLG2Q15700 870 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 CARTPTQ16568 116 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 SPANXN3Q5MJ09 141 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 CLVS2Q5SYC1 327 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 RARS2Q5T160 578 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 NOTUMQ6P988 496 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 CYP20A1Q6UW02 462 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 NAPRTQ6XQN6 538 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 AGR3Q8TD06 166 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 FIG4Q92562 907 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 OR2B2Q9GZK3 357 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 NAA50Q9GZZ1 169 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 NOL6Q9H6R4 1146 aaKnown RBP12.49□□□□□ -0.41
LITAF-221ENST00000622633 CXorf21Q9HAI6 301 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ACSS2Q9NR19 701 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 IGSF5Q9NSI5 407 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 MAU2Q9Y6X3 613 aa12.49□□□□□ -0.41
LITAF-221ENST00000622633 ATP6V1G2-DDX39BF2Z307 99 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SLC9A3R1O14745 358 aaPredicted RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 DCXO43602 365 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SMPD1P17405 629 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 NOS2P35228 1153 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 NUDT1P36639 197 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 TXNL4AP83876 142 aaKnown RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 IRF9Q00978 393 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 FSTL4Q6MZW2 842 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 BNC2Q6ZN30 1099 aaPredicted RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 ZNF781Q8N8C0 355 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 ANKRD53Q8N9V6 530 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 EMID1Q96A84 441 aaPredicted RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 NPY6RQ99463 290 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 DUSP16Q9BY84 665 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 COG4Q9H9E3 785 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 MAGEE1Q9HCI5 957 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SEPT3Q9UH03 358 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 COMMD10Q9Y6G5 202 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 OTOFQ9HC10 1997 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 CROCCQ5TZA2 2017 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 DCLK1O15075 740 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SHOXO15266 292 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 DAB1O75553 588 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 CD4P01730 458 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 MMP3P08254 477 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 CD1EP15812 388 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 IGFBP6P24592 240 aaPredicted RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 PTPN3P26045 913 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 HSPA13P48723 471 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SLC9A3P48764 834 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 FCHO2Q0JRZ9 810 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 TRAF2Q12933 501 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 PAFAH1B3Q15102 231 aaKnown RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
LITAF-221ENST00000622633 CERCAMQ5T4B2 595 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 GPR107Q5VW38 600 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 TMEM26Q6ZUK4 368 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 FRMD7Q6ZUT3 714 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 SNX29P2Q8IUI4 249 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 PSTKQ8IV42 348 aaKnown RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
LITAF-221ENST00000622633 DEFB107AQ8IZN7 70 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 DNAAF3Q8N9W5 541 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 B3GALNT2Q8NCR0 500 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
LITAF-221ENST00000622633 ADCY4Q8NFM4 1077 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms