RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 COMMD8Q9NX08 183 aa17.52■□□□□ 0.4
FAM3A-222ENST00000621967 CCDC189A1A4V9 331 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 WASH4PA8MWX3 477 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 AIM2O14862 343 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 AHCYL1O43865 530 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 RNASEH1O60930 286 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 XYLBO75191 536 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 HNRNPA1P09651 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 UQCRBP14927 111 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 CD151P48509 253 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 TAS2R39P59534 338 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 POU4F1Q01851 419 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 CYLC2Q14093 348 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 CNGA3Q16281 694 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 BTBD8Q5XKL5 378 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 KIAA0408Q6ZU52 694 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 Q7L0L9 218 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 DNAJB7Q7Z6W7 309 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 RTL3Q8N8U3 475 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 TUBGCP5Q96RT8 1024 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 SFXN1Q9H9B4 322 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 ZBTB26Q9HCK0 441 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 SPATS2LQ9NUQ6 558 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 RBM22Q9NW64 420 aaKnown RBP eCLIP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 OSER1Q9NX31 292 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 CLIC5Q9NZA1 410 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 KCNU1A8MYU2 1149 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 MSI1O43347 362 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PEX19P40855 299 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PGFP49763 221 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 KPNA2P52292 529 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 KCNC3Q14003 757 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 OGFRL1Q5TC84 451 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 ZNF470Q6ECI4 717 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 BNC2Q6ZN30 1099 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PIWIL4Q7Z3Z4 852 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PGAM4Q8N0Y7 254 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 TXNDC5Q8NBS9 432 aaKnown RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 HIPK4Q8NE63 616 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 ELMO2Q96JJ3 720 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 TSC22D3Q99576 134 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 TTLL2Q9BWV7 592 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 FSD1LQ9BXM9 530 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 FAM192AQ9GZU8 254 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 ARNT2Q9HBZ2 717 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 UXTQ9UBK9 157 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-222ENST00000621967 SFMBT1Q9UHJ3 866 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 SCML2Q9UQR0 700 aa17.51■□□□□ 0.39
FAM3A-222ENST00000621967 GREB1Q4ZG55 1949 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 PMPCBO75439 489 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 AQP4P55087 323 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 SATB1Q01826 763 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 TAF10Q12962 218 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 RFTN1Q14699 578 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-222ENST00000621967 ZNF423Q2M1K9 1284 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 KDELC1Q6UW63 502 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 RCN3Q96D15 328 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 TRMT2BQ96GJ1 504 aaKnown RBP17.5■□□□□ 0.39
FAM3A-222ENST00000621967 PPP1R36Q96LQ0 422 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 CATSPER2Q96P56 530 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 ATP13A1Q9HD20 1204 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 IGSF5Q9NSI5 407 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 IL37Q9NZH6 218 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 NCKIPSDQ9NZQ3 722 aa17.5■□□□□ 0.39
FAM3A-222ENST00000621967 C6orf203Q9P0P8 240 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-222ENST00000621967 E9PAM4 449 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 LINC01565O15544 149 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 SMIM24O75264 130 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 GLP2RO95838 553 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 PEX11BO96011 259 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 HMGA1P17096 107 aaKnown RBP17.49■□□□□ 0.39
FAM3A-222ENST00000621967 ATP5F1P24539 256 aaPredicted RBP17.49■□□□□ 0.39
FAM3A-222ENST00000621967 CHRNA4P43681 627 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 PAPOLAP51003 745 aaKnown RBP17.49■□□□□ 0.39
FAM3A-222ENST00000621967 THOP1P52888 689 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 TRIP10Q15642 601 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 LRRC36Q1X8D7 754 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 TMEM198Q66K66 360 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 NEPROQ6NW34 567 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 EP400NLQ6ZTU2 488 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 HEXDCQ8WVB3 486 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 FATE1Q969F0 183 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 MYRFLQ96LU7 910 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 BTBD9Q96Q07 612 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 RANBP9Q96S59 729 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 OMDQ99983 421 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 CORO1BQ9BR76 489 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 NOL6Q9H6R4 1146 aaKnown RBP17.49■□□□□ 0.39
FAM3A-222ENST00000621967 PIDD1Q9HB75 910 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 ASAH2Q9NR71 780 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 GMIPQ9P107 970 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 HS3ST4Q9Y661 456 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 ANKRD36A6QL64 1941 aa17.49■□□□□ 0.39
FAM3A-222ENST00000621967 FAM92AA1XBS5 289 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms