RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ASCC3Q8N3C0 2202 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 KANSL1LA0AUZ9 987 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 MAP2K7O14733 419 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CHRNA1P02708 482 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CFIP05156 583 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 HTR7P34969 479 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 GRIA4P48058 902 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 RPL14P50914 215 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 BLVRAP53004 296 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 ECT2LQ008S8 904 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 SOX4Q06945 474 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 BST1Q10588 318 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TRAF2Q12933 501 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 Q6ZVU0 165 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 GALNT13Q8IUC8 556 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 ATG16L2Q8NAA4 619 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 KYQ8NBH2 561 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TSTD1Q8NFU3 115 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 ZSCAN18Q8TBC5 510 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 ART4Q93070 314 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 NSMCE2Q96MF7 247 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 LRRC4CQ9HCJ2 640 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CHD4Q14839 1912 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 A0A1W2PQ67 120 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 BCLAF3A2AJT9 711 aaKnown RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 CCDC154A6NI56 674 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 OR10H2O60403 315 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 IFNA14P01570 189 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 LBPP18428 481 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 NDST2P52849 883 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 NRLP54845 237 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 ATP6V0D1P61421 351 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 GRM2Q14416 872 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 LYPLAL1Q5VWZ2 237 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TXNRD3NBQ6F5E7 133 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 KLHL35Q6PF15 583 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CRELD2Q6UXH1 353 aaPredicted RBP9.25□□□□□ -0.93
GGA3-223ENST00000621870 CERS6Q6ZMG9 384 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 C17orf64Q86WR6 236 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 STYXQ8WUJ0 223 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TEKT5Q96M29 485 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.93
GGA3-223ENST00000621870 ASB2Q96Q27 587 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 HAPLN3Q96S86 360 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 TMEM209Q96SK2 561 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 GPR21Q99679 349 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CCDC134Q9H6E4 229 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 FLRT1Q9NZU1 646 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 FKBPLQ9UIM3 349 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 CROTQ9UKG9 612 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
GGA3-223ENST00000621870 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 FAM47E-STBD1D6RA91 191 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ATG13O75143 517 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ATP6V1C1P21283 382 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 RPS7P62081 194 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 NAE1Q13564 534 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 LRRC8BQ6P9F7 803 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 PRR23BQ6ZRT6 265 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 SLC35F5Q8WV83 523 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 CLP1Q92989 425 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 RSPH9Q9H1X1 276 aaPredicted RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 GBA3Q9H227 469 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 IL23AQ9NPF7 189 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 PCDH12Q9NPG4 1184 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 FZD10Q9ULW2 581 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 DUOX1Q9NRD9 1551 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 DNAJC25-GNG10A0A024R161 153 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 RFPL2O75678 378 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 CALB2P22676 271 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 TRPC1P48995 793 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 RPL38P63173 70 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 SLC10A7Q0GE19 358 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ALFQ53S48 1182 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ANKRD22Q5VYY1 191 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
GGA3-223ENST00000621870 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 RPAINQ86UA6 219 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 SCUBE1Q8IWY4 988 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 LRRC15Q8TF66 581 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 IRF7Q92985 503 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 MARK4Q96L34 752 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 MRPL57Q9BQC6 102 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 TAGLN3Q9UI15 199 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 GTF2A1LQ9UNN4 478 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 A0A1W2PPM1 405 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 TTC24A2A3L6 582 aaPredicted RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 FFAR2O15552 330 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 SGTAO43765 313 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 CA3P07451 260 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ADH5P11766 374 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 HGFP14210 728 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 IL1R2P27930 398 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 RRM2P31350 389 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ENPEPQ07075 957 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 FASTKD3Q14CZ7 662 aaKnown RBP9.24□□□□□ -0.93
GGA3-223ENST00000621870 CCDC142Q17RM4 750 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
GGA3-223ENST00000621870 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms