RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZNF781Q8N8C0 355 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 IRF7Q92985 503 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 MTFMTQ96DP5 389 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 NSUN5Q96P11 429 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 VAT1Q99536 393 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 GPR21Q99679 349 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 RBBP8Q99708 897 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TMEM120AQ9BXJ8 343 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 FOXP3Q9BZS1 431 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 MYLK2Q9H1R3 596 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 IL37Q9NZH6 218 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ZNF212Q9UDV6 495 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 SLC30A1Q9Y6M5 507 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 DRGXA6NNA5 263 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 STK25O00506 426 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 LDB2O43679 373 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 MOSPD3O75425 235 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 RALBP11234 206 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TFEBP19484 476 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TIE1P35590 1138 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 MAGEA3P43357 314 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 NPY2RP49146 381 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 ARFIP2P53365 341 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 SESN3P58005 492 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 SPANXN3Q5MJ09 141 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 CPNE9Q8IYJ1 553 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 RNF168Q8IYW5 571 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 OR4L1Q8NH43 312 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 HTATIP2Q9BUP3 242 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 MAGEH1Q9H213 219 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 SEMA4BQ9NPR2 832 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.54□□□□□ -0.72
VPS11-208ENST00000621676 HEATR9A2RTY3 570 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 PRRT4C9JH25 899 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 CFLARO15519 480 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 XYLBO75191 536 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 LEFTY1O75610 366 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 USP1O94782 785 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TCN1P20061 433 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 CDC25CP30307 473 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 HNF1BP35680 557 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 PXNP49023 591 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 FNDC3BQ53EP0 1204 aaKnown RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 SERPINA13PQ6UXR4 307 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 NLRP9Q7RTR0 991 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 DENND1AQ8TEH3 1009 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 PYCR2Q96C36 320 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 ABHD8Q96I13 439 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 MAGEB18Q96M61 343 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TSGA13Q96PP4 275 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 ACE2Q9BYF1 805 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 EMCNQ9ULC0 261 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
VPS11-208ENST00000621676 CFAP20Q9Y6A4 193 aaKnown RBP10.54□□□□□ -0.72
VPS11-208ENST00000621676 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
VPS11-208ENST00000621676 C2orf81A6NN90 581 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 HEPACAM2A8MVW5 462 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 UPK3BL1B0FP48 263 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 UPK3BL2E5RIL1 263 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 UBXN8O00124 270 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 CDC7O00311 574 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 KDELR3O43731 214 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 TULP3O75386 442 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 PRAMEF1O95521 474 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 PABPC1P11940 636 aaKnown RBP10.53□□□□□ -0.72
VPS11-208ENST00000621676 PAMP19021 973 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 GDI1P31150 447 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 SERPINB5P36952 375 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 AGTR2P50052 363 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 KPNA1P52294 538 aaPredicted RBP10.53□□□□□ -0.72
VPS11-208ENST00000621676 RING1Q06587 406 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 Q7L0L9 218 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 FGF14Q92915 247 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 PBXIP1Q96AQ6 731 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 SGSM3Q96HU1 749 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 LRRC37BQ96QE4 947 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 PSKH2Q96QS6 385 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 KCNA7Q96RP8 456 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 TRIM8Q9BZR9 551 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 SPHK2Q9NRA0 654 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 CRLS1Q9UJA2 301 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 SMG5Q9UPR3 1016 aaKnown RBP10.53□□□□□ -0.72
VPS11-208ENST00000621676 PKP3Q9Y446 797 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 SPTBP11277 2137 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 DOCK9Q9BZ29 2069 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 TRBV23OR9-2A0A075B6M9 112 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 EPHX1P07099 455 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 POLR2EP19388 210 aaKnown RBP10.53□□□□□ -0.72
VPS11-208ENST00000621676 CASP2P42575 452 aa10.53□□□□□ -0.72
VPS11-208ENST00000621676 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms