RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 UNC93B1Q9H1C4 597 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 EPS8L2Q9H6S3 715 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TLR9Q9NR96 1032 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MORF4L1Q9UBU8 362 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 PCDHGB3Q9Y5G1 929 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 KLRG2A4D1S0 409 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC28A1O00337 649 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MAGEA10P43363 369 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CRADDP78560 199 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CPSF6Q16630 551 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CERCAMQ5T4B2 595 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 LINGO4Q6UY18 593 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 KYAT3Q6YP21 454 aaKnown RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM220AQ7Z4H9 259 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TMEM139Q8IV31 216 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 C12orf42Q96LP6 360 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 KCNN2Q9H2S1 579 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 DNAJC18Q9H819 358 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MAT2BQ9NZL9 334 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ZFP37Q9Y6Q3 630 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 A0A1W2PRU2 124 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 OR6B1O95007 311 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TIE1P35590 1138 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CSNK2BP67870 215 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 FAAP100Q0VG06 881 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 AMZ1Q400G9 498 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 LCLAT1Q6UWP7 414 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SMYD1Q8NB12 490 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SIPA1Q96FS4 1042 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 C5orf34Q96MH7 638 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CEP44Q9C0F1 390 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CCDC167Q9P0B6 97 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CORO2BQ9UQ03 480 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ERVK-11Q9UQG0 969 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 Q9Y3F1 56 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 E9PAM4 449 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 AP3D1O14617 1153 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 PIGNO95427 931 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 CAPN1P07384 714 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 NOMO3P69849 1222 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 GNA12Q03113 381 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 EOGTQ5NDL2 527 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 HYIQ5T013 277 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 POLNQ7Z5Q5 900 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 ECHDC2Q86YB7 292 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 PEX5LQ8IYB4 626 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 SH3RF2Q8TEC5 729 aa9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
CLTCL1-211ENST00000621271 C5orf60A6NFR6 353 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SAC3D1A6NKF1 404 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 PRMT5O14744 637 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TPP1O14773 563 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ATP5F1P24539 256 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 PURAQ00577 322 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 DQX1Q8TE96 717 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CDH19Q9H159 772 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 EXD2Q9NVH0 621 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 NEMP2A6NFY4 417 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 C9J4A7 227 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TOP3BO95985 862 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CYP1A2P05177 515 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TPP2P29144 1249 aaPredicted RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 HTR7P34969 479 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 AP1S1P61966 158 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TRIM16LQ309B1 348 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ZBTB49Q6ZSB9 765 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 GPRIN3Q6ZVF9 776 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 IRF7Q92985 503 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 TRAPPC9Q96Q05 1148 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SIKE1Q9BRV8 207 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 BCO2Q9BYV7 579 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 MAGEH1Q9H213 219 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SERHL2Q9H4I8 314 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 GLOD4Q9HC38 313 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SERHLQ9NQF3 203 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CHST7Q9NS84 486 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SEMA3GQ9NS98 782 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ETAA1Q9NY74 926 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM25AB3EWG3 89 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM25CB3EWG5 89 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 FAM25GB3EWG6 89 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 MATN4O95460 622 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 DRD4P21917 467 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 GSSP48637 474 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 RPL14P50914 215 aaKnown RBP9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 LILRA4P59901 499 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 CEP78Q5JTW2 689 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 DGKKQ5KSL6 1271 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 DNAJC19Q96DA6 116 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 SNX27Q96L92 541 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF354BQ96LW1 612 aa9.79□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF184Q99676 751 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms