RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PAPSS2O95340 614 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 TGDSO95455 350 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 GSRP00390 522 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 GRK2P25098 689 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 GRIA4P48058 902 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 FAM83EQ2M2I3 478 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 EML3Q32P44 896 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NAPRTQ6XQN6 538 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 KIAA0408Q6ZU52 694 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CLNKQ7Z7G1 428 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CENPLQ8N0S6 344 aaPredicted RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 DNAJC5GQ8N7S2 189 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MDGA1Q8NFP4 955 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 RAB3IL1Q8TBN0 382 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 SPPL3Q8TCT6 385 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 STYXQ8WUJ0 223 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 CDKN2AIPNLQ96HQ2 116 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 BBS2Q9BXC9 721 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 NMUR2Q9GZQ4 415 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 MAFFQ9ULX9 164 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 FAM50BQ9Y247 325 aa9.95□□□□□ -0.82
VTA1-205ENST00000620996 PRRC2BQ5JSZ5 2229 aaKnown RBP9.95□□□□□ -0.82
VTA1-205ENST00000620996 G3V2L1 256 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 SNNO75324 88 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 EPOP01588 193 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 APOA4P06727 396 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ENO1P06733 434 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 PTPN2P17706 415 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 CLCN4P51793 760 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CDKN2DP55273 166 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 SLC7A9P82251 487 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MXRA7P84157 204 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 DLG1Q12959 904 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 SEMA3AQ14563 771 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ARMC12Q5T9G4 340 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CLEC14AQ86T13 490 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ZNF781Q8N8C0 355 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 DCAF4L2Q8NA75 395 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MYLIPQ8WY64 445 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ISL2Q96A47 359 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 PHF21BQ96EK2 531 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MYO19Q96H55 970 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 APOL5Q9BWW9 433 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GATA5Q9BWX5 397 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 KIAA1522Q9P206 1035 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 DNMT3BQ9UBC3 853 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 LHX3Q9UBR4 397 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 A0A087X1B8 175 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ANKRD66B4E2M5 251 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GPR39O43194 453 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GREM1O60565 184 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 SRP72O76094 671 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 RHOBTB1O94844 696 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ARHGEF15O94989 841 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 KLHL2O95198 593 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 LATS1O95835 1130 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 OLFM2O95897 454 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CD160O95971 181 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CA3P07451 260 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CHRNGP07510 517 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 BMP1P13497 986 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 NCF2P19878 526 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 MC4RP32245 332 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 LEPRP48357 1165 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 CDKN1CP49918 316 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 KPNA2P52292 529 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 BCL2L1Q07817 233 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 SLC5A9Q2M3M2 681 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GALNTL6Q49A17 601 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 TMEM25Q86YD3 366 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 C12orf76Q8N812 135 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 ZNF398Q8TD17 642 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 NAT14Q8WUY8 206 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 TADA1Q96BN2 335 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 TRIB3Q96RU7 358 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 LRRC3Q9BY71 257 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MCOLN1Q9GZU1 580 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 RETREG1Q9H6L5 497 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ALG9Q9H6U8 611 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 KCNK4Q9NYG8 393 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 GTSE1Q9NYZ3 720 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ZNF510Q9Y2H8 683 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 NUMBLQ9Y6R0 609 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 ZMPSTE24O75844 475 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 UNC5CO95185 931 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 S1PR4O95977 384 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 NQO1P15559 274 aaKnown RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 CR2P20023 1033 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 LPOP22079 712 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 MPSTP25325 297 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 TNK2Q07912 1038 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 CCDC15Q0P6D6 951 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 MSLNQ13421 630 aaPredicted RBP9.94□□□□□ -0.82
VTA1-205ENST00000620996 DBN1Q16643 649 aa9.94□□□□□ -0.82
VTA1-205ENST00000620996 AGAP9Q5VTM2 703 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms