RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TMEM216Q9P0N5 145 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 MAFFQ9ULX9 164 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CSADQ9Y600 493 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 SNCAIPQ9Y6H5 919 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 TCRBV7S3A2A0A539 114 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CCDC78A2IDD5 438 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 FAM86B1E9PN63 330 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 H2AFYO75367 372 aaKnown RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 APOL3O95236 402 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ANGPTL1O95841 491 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 IL1BP01584 269 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ZBTB48P10074 688 aaPredicted RBP7.4□□□□□ -1.22
PDE6A-205ENST00000617647 HLA-DPA1P20036 260 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CBLP22681 906 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 SCN1BQ07699 218 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 GTF2H3Q13889 308 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ALG1LQ6GMV1 187 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 XKRXQ6PP77 449 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 ADAMTSL2Q86TH1 951 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 FBXL6Q8N531 539 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 POF1BQ8WVV4 589 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CYP3A43Q9HB55 503 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 IFT46Q9NQC8 304 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CHRAC1Q9NRG0 131 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 REV1Q9UBZ9 1251 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 CYB5R1Q9UHQ9 305 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 SNX6Q9UNH7 406 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 RAP2CQ9Y3L5 183 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
PDE6A-205ENST00000617647 A0A096LPK6 155 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 CXorf49A8MYA2 514 aaPredicted RBP7.4□□□□□ -1.23
PDE6A-205ENST00000617647 CHRNA1P02708 482 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 S100A6P06703 90 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 ALAS2P22557 587 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 AVPR1AP37288 418 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 POLD2P49005 469 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 GALNT3Q14435 633 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 USP10Q14694 798 aaKnown RBP7.4□□□□□ -1.23
PDE6A-205ENST00000617647 SLC44A5Q8NCS7 719 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 CCNYQ8ND76 341 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 SLC7A14Q8TBB6 771 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 SLC5A11Q8WWX8 675 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 FAM20AQ96MK3 541 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 C20orf27Q9GZN8 174 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 KCNN2Q9H2S1 579 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 MMP27Q9H306 513 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 RSAD1Q9HA92 442 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 ERVK13-1Q9NX77 482 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 IPO11Q9UI26 975 aaKnown RBP7.4□□□□□ -1.23
PDE6A-205ENST00000617647 CDH9Q9ULB4 789 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 GRIP1Q9Y3R0 1128 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 BCL9LQ86UU0 1499 aa7.4□□□□□ -1.23
PDE6A-205ENST00000617647 YKT6O15498 198 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PRPSAP2O60256 369 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PLOD3O60568 738 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CSH1P0DML2 217 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CSH2P0DML3 217 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CYP4B1P13584 511 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 NPR3P17342 541 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MYL9P24844 172 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 YWHABP31946 246 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 HAAOP46952 286 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 GRIA4P48058 902 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CYP4F2P78329 520 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 DEFA5Q01523 94 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF45Q02386 682 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CYP4F3Q08477 520 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SPIRE1Q08AE8 756 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 C19orf57Q0VDD7 668 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SNTA1Q13424 505 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 DUSP7Q16829 419 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PYDC2Q56P42 97 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FAM102BQ5T8I3 360 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CYP4A22Q5TCH4 519 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 MBLAC2Q68D91 279 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 REP15Q6BDI9 236 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 GLYATQ6IB77 296 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FAM131AQ6UXB0 335 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CMC1Q7Z7K0 106 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PM20D2Q8IYS1 436 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CPA6Q8N4T0 437 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SETD9Q8NE22 299 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 DNAJB14Q8TBM8 379 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FAM149B1Q96BN6 582 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 PTERQ96BW5 349 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 LGALS12Q96DT0 336 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FRMD6Q96NE9 622 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 FYTTD1Q96QD9 318 aaKnown RBP7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CHCHD6Q9BRQ6 235 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 TEKT3Q9BXF9 490 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 CHST12Q9NRB3 414 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 SNX15Q9NRS6 342 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 F8VP50 259 aa7.39□□□□□ -1.23
PDE6A-205ENST00000617647 KATNA1O75449 491 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms