RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NAB1Q13506 487 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 ITIH4Q14624 930 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 PITRM1Q5JRX3 1037 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 ALG1LQ6GMV1 187 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 PSAPL1Q6NUJ1 521 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 ZNF549Q6P9A3 640 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 RGS9BPQ6ZS82 235 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 LYSMD3Q7Z3D4 306 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
NEK3-207ENST00000617054 SFTPA1Q8IWL2 248 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 CNTN4Q8IWV2 1026 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 OR4L1Q8NH43 312 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 HEXDCQ8WVB3 486 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 SMG7Q92540 1137 aaKnown RBP7.81□□□□□ -1.16
NEK3-207ENST00000617054 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
NEK3-207ENST00000617054 PRKD2Q9BZL6 878 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 NKX2-4Q9H2Z4 354 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 CYP4F12Q9HCS2 524 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 POLR3BQ9NW08 1133 aaPredicted RBP7.81□□□□□ -1.16
NEK3-207ENST00000617054 ARMCX1Q9P291 453 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 ACOT9Q9Y305 439 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 CAPN7Q9Y6W3 813 aa7.81□□□□□ -1.16
NEK3-207ENST00000617054 CLDN7O95471 211 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CYBBP04839 570 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CHRNGP07510 517 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 DLDP09622 509 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 CCDC166P0CW27 439 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SERPINB3P29508 390 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 MAGEA12P43365 314 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SCTRP47872 440 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 KCNC1P48547 511 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SLC1A6P48664 564 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SLC12A2P55011 1212 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CSE1LP55060 971 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 ZNF449Q6P9G9 518 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 KYAT3Q6YP21 454 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 Q6ZVU0 165 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TSPAN33Q86UF1 283 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CCDC117Q8IWD4 279 aaPredicted RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 FAM217AQ8IXS0 508 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 FIBINQ8TAL6 211 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 ACMSDQ8TDX5 336 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 PTCD2Q8WV60 388 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 IRF7Q92985 503 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 EXT2Q93063 718 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 ASIC4Q96FT7 647 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 PPP1R2P1Q96PQ5 205 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TMEM237Q96Q45 408 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TMEM120AQ9BXJ8 343 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 MRM3Q9HC36 420 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 XPR1Q9UBH6 696 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 HEY2Q9UBP5 337 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 LINC01565O15544 149 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CBX6O95503 412 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 RALBP11234 206 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SRCP12931 536 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TSPAN8P19075 237 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TARSP26639 723 aaKnown RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 AQP5P55064 265 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 GEN1Q17RS7 908 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TAF1BQ53T94 588 aaPredicted RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 ZRANB3Q5FWF4 1079 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 PRSS36Q5K4E3 855 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 HECTD2Q5U5R9 776 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 RFLNAQ6ZTI6 216 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 EP400NLQ6ZTU2 488 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 NLRP9Q7RTR0 991 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CLEC14AQ86T13 490 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 GPR65Q8IYL9 337 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 CHST14Q8NCH0 376 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 PHF21BQ96EK2 531 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 TRIM55Q9BYV6 548 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 EBF3Q9H4W6 596 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 ZDHHC6Q9H6R6 413 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 SPHK2Q9NRA0 654 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 HECAQ9UBI9 543 aaPredicted RBP7.8□□□□□ -1.16
NEK3-207ENST00000617054 MAFFQ9ULX9 164 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 DNAJC16Q9Y2G8 782 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 VWA7Q9Y334 891 aa7.8□□□□□ -1.16
NEK3-207ENST00000617054 C2orf81A6NN90 581 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 C5orf67F2Z3F1 127 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 XYLBO75191 536 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 RPP40O75818 363 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 EPOP01588 193 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 MPOP05164 745 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 KCNA5P22460 613 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 MC4RP32245 332 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 LEPRP48357 1165 aaKnown RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 ARFIP2P53365 341 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 NAGLUP54802 743 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 TIAL1Q01085 375 aaKnown RBP eCLIP7.79□□□□□ -1.16
NEK3-207ENST00000617054 OCRLQ01968 901 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 SLC12A1Q13621 1099 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 RFTN1Q14699 578 aaPredicted RBP7.79□□□□□ -1.16
NEK3-207ENST00000617054 ARHGAP15Q53QZ3 475 aa7.79□□□□□ -1.16
NEK3-207ENST00000617054 INO80DQ53TQ3 878 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms