RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TBC1D3IA0A087WXS9 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3EA0A087X179 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3KA0A087X1G2 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 GSAPA4D1B5 854 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3FA6NER0 549 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3LB9A6J9 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 MSI1O43347 362 aaKnown RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 SNAP91O60641 907 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 NDST3O95803 873 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 CAPN1P07384 714 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3HP0C7X1 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PRG2P13727 222 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 GBE1Q04446 702 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PARP15Q460N3 678 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3GQ6DHY5 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3CQ6IPX1 549 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 SLC26A9Q7LBE3 791 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 TBC1D3Q8IZP1 549 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PHC3Q8NDX5 983 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 OR4K2Q8NGD2 314 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 SLC4A5Q9BY07 1137 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 FAM192AQ9GZU8 254 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PHPT1Q9NRX4 125 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 VPS4AQ9UN37 437 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 DYTNA2CJ06 578 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 MMP3P08254 477 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ADSSP30520 456 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 RFX4Q33E94 735 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ANXA8L1Q5VT79 327 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 C10orf107Q8IVU9 208 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 DSELQ8IZU8 1212 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ZNF248Q8NDW4 579 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 OR7A2PQ8NGA2 310 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ZNF607Q96SK3 696 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 SLC28A3Q9HAS3 691 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PRDM8Q9NQV8 689 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 DHRS12A0PJE2 317 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 EDF1O60869 148 aaKnown RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 MFN2O95140 757 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 CST3P01034 146 aaPredicted RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ITGAXP20702 1163 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 MPPE1Q53F39 396 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 RNASEH2BQ5TBB1 312 aaKnown RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ITCHQ96J02 903 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 IKZF4Q9H2S9 585 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 CMTM6Q9NX76 183 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 MRPL39Q9NYK5 338 aaKnown RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 PRPF19Q9UMS4 504 aaKnown RBP17.74■□□□□ 0.43
ATXN2-227ENST00000616825 BTBD3Q9Y2F9 522 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
ATXN2-227ENST00000616825 ITSN1Q15811 1721 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 WNT7AO00755 349 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 ENTPD5O75356 428 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 LINC00032P0C843 101 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SLC6A2P23975 617 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SSR2P43308 183 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 GPR158Q5T848 1215 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 MSL3Q8N5Y2 521 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 NAT16Q8N8M0 369 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 RNASE11Q8TAA1 199 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 RACGAP1Q9H0H5 632 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 TLE6Q9H808 572 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 IKZF3Q9UKT9 509 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 A0A1W2PQH9 124 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 LRCH4O75427 683 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 UGT2B4P06133 528 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SELPP16109 830 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 RHOQP17081 205 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SLC7A2P52569 658 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 USP4Q13107 963 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 FOXR1Q6PIV2 292 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 CRTC3Q6UUV7 619 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 TMC5Q6UXY8 1006 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 UBE2R2Q712K3 238 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 ADGRG2Q8IZP9 1017 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 DHX33Q9H6R0 707 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 IMP3Q9NV31 184 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 A0A1W2PQ67 120 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SLC22A3O75751 556 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 COL6A2P12110 1019 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 STAT5AP42229 794 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 SEMA5AQ13591 1074 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 BROXQ5VW32 411 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 CAPN13Q6MZZ7 669 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 ABRAXAS1Q6UWZ7 409 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 RBM23Q86U06 439 aaKnown RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 C12orf50Q8NA57 414 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 NKD2Q969F2 451 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 PPCDCQ96CD2 204 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 LRRC4CQ9HCJ2 640 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 PCDHB1Q9Y5F3 818 aa17.73■□□□□ 0.43
ATXN2-227ENST00000616825 COL3A1P02461 1466 aaPredicted RBP17.73■□□□□ 0.43
ATXN2-227ENST00000616825 A0A1W2PPM1 405 aa17.72■□□□□ 0.43
ATXN2-227ENST00000616825 GTPBP1O00178 669 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms