RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 H3BRJ5 948 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 AGRPO00253 132 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 MYCLP1P12525 358 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 PNLIPP16233 465 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 AMPD1P23109 780 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 PCK1P35558 622 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 DPYSL2Q16555 572 aa20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 PDCD6IPQ8WUM4 868 aaKnown RBP20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 CCNL2Q96S94 520 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 NAT10Q9H0A0 1025 aaKnown RBP20.8■□□□□ 0.92
TRAPPC3-208ENST00000616074 AHCTF1Q8WYP5 2266 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 EFSO43281 561 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 SOCS5O75159 536 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 MBD3O95983 291 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 CPP00450 1065 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 JMJD7P0C870 316 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 SKILP12757 684 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 ITIH1P19827 911 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 VIPR1P32241 457 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 ARL4AP40617 200 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 ZFP36L1Q07352 338 aaKnown RBP20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 KLHL30Q0D2K2 578 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 TGIF1Q15583 401 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 TSR1Q2NL82 804 aaKnown RBP20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 DENND2CQ68D51 928 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 TMPRSS9Q7Z410 1059 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 POLNQ7Z5Q5 900 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 HSPH1Q92598 858 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 NUDCD1Q96RS6 583 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 BPIFA3Q9BQP9 254 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 SUDS3Q9H7L9 328 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 CARS2Q9HA77 564 aaKnown RBP20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 NOD2Q9HC29 1040 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 MRPL47Q9HD33 250 aaKnown RBP20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 ACSL6Q9UKU0 697 aa20.79■□□□□ 0.92
TRAPPC3-208ENST00000616074 A0A1W2PQ67 120 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 A0A1W2PQC6 194 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 PDE2AO00408 941 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 NUDT21O43809 227 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 HEXIM1O94992 359 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 MYBL1P10243 752 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 LHCGRP22888 699 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 HSPA9P38646 679 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 ETV3P41162 512 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 MAXP61244 160 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 TRAF2Q12933 501 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 ARHGEF7Q14155 803 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 TMCO3Q6UWJ1 677 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 HEATR4Q86WZ0 1026 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 NRROSQ86YC3 692 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 SLITRK4Q8IW52 837 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 GPBAR1Q8TDU6 330 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 TRIM11Q96F44 468 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 CSPG4P5Q96PW8 444 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 MGME1Q9BQP7 344 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 TEX101Q9BY14 249 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 PHPT1Q9NRX4 125 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 SPATS2LQ9NUQ6 558 aaKnown RBP20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 TMEM63CQ9P1W3 806 aa20.78■□□□□ 0.92
TRAPPC3-208ENST00000616074 MAFKO60675 156 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 FUCA1P04066 466 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 CEACAM5P06731 702 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 CCNB1P14635 433 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 ETV5P41161 510 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 MAZP56270 477 aaKnown RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 B4GALNT1Q00973 533 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 SRSF6Q13247 344 aaKnown RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 PTPRRQ15256 657 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 TXNRD3NBQ6F5E7 133 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 HSD11B1LQ7Z5J1 315 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 CBARPQ8N350 705 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 KIAA1524Q8TCG1 905 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 PTCD2Q8WV60 388 aaKnown RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 DTD2Q96FN9 168 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 FRMD8Q9BZ67 464 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 ISCUQ9H1K1 167 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 PHTF1Q9UMS5 762 aa20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 FLNBO75369 2602 aaKnown RBP20.77■□□□□ 0.92
TRAPPC3-208ENST00000616074 PRAMEF33A0A0G2JMD5 474 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 A0A1B0GTH6 734 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 NPIPB15A6NHN6 443 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 SMTNL1A8MU46 457 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 NVLO15381 856 aaKnown RBP20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 PRAMEF10O60809 474 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 RARAP10276 462 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 LIPCP11150 499 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 CYP2A6P11509 494 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 CDK3Q00526 305 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 BOLA3Q53S33 107 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 C17orf82Q86X59 251 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 ATPAF2Q8N5M1 289 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 ZDHHC1Q8WTX9 485 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 TMEM159Q96B96 161 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 MED8Q96G25 268 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 SEMA6CQ9H3T2 930 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 SUFUQ9UMX1 484 aa20.76■□□□□ 0.91
TRAPPC3-208ENST00000616074 BOD1L1Q8NFC6 3051 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms