RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 OCLNQ16625 522 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 VITQ6UXI7 678 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 SLC29A4Q7RTT9 530 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZNF720Q7Z2F6 126 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CATSPER2Q96P56 530 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 TMEM168Q9H0V1 697 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZNF35P13682 527 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZNF132P52740 706 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 SPIBQ01892 262 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZBTB6Q15916 424 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PSMA8Q8TAA3 256 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 UROC1Q96N76 676 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 TBX1O43435 398 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 LAMTOR5O43504 91 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 AFF1P51825 1210 aaKnown RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 C15orf59Q2T9L4 293 aaPredicted RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 GRHL2Q6ISB3 625 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 MAP4K1Q92918 833 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 C16orf58Q96GQ5 468 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 TBL1XR1Q9BZK7 514 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ADGRA3Q8IWK6 1321 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 INMTO95050 263 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 GRK6P43250 576 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 EEF1A2Q05639 463 aaKnown RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
TCF4-248ENST00000616053 KIAA0319Q5VV43 1072 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZMIZ2Q8NF64 920 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 NELL1Q92832 810 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 USP29Q9HBJ7 922 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 ZFP14Q9HCL3 533 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
TCF4-248ENST00000616053 CCDC182A6NF36 153 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SCAMP1O15126 338 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 AKR1D1P51857 326 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
TCF4-248ENST00000616053 TMPRSS9Q7Z410 1059 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ZDHHC13Q8IUH4 622 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 POC5Q8NA72 575 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 LINGO1Q96FE5 620 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SH3BGRL2Q9UJC5 107 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ICAM1P05362 532 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 NCK1P16333 377 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ZNF445P59923 1031 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 USP46P62068 366 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 KDELC1Q6UW63 502 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ZNF709Q8N972 641 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 KCT2Q8NC54 265 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SRFBP1Q8NEF9 429 aaKnown RBP12.65□□□□□ -0.38
TCF4-248ENST00000616053 SRMSQ9H3Y6 488 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SMURF2Q9HAU4 748 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ZNF639Q9UID6 485 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 CARD8Q9Y2G2 431 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 PDE5AO76074 875 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 LDLRP01130 860 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 RLN2P04090 185 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 ASLP04424 464 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 GALCP54803 685 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SMAD3P84022 425 aaKnown RBP12.65□□□□□ -0.38
TCF4-248ENST00000616053 ELP6Q0PNE2 266 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 TIGD6Q17RP2 521 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 WDR45BQ5MNZ6 344 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 NOXRED1Q6NXP6 359 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SLC27A1Q6PCB7 646 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 RTKNQ9BST9 563 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 TRPV4Q9HBA0 871 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 KIAA1522Q9P206 1035 aaPredicted RBP12.65□□□□□ -0.38
TCF4-248ENST00000616053 HEY2Q9UBP5 337 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SNAP23O00161 211 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 RARGP13631 454 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 CHN1P15882 459 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 FGFR3P22607 806 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 LRRC17Q8N6Y2 441 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 SLC27A5Q9Y2P5 690 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 KCNJ13O60928 360 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 UGT2B17O75795 530 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
TCF4-248ENST00000616053 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 DGUOKQ16854 277 aa12.65□□□□□ -0.38
TCF4-248ENST00000616053 HKDC1Q2TB90 917 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms