RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MAPK15Q8TD08 544 aa19.17■□□□□ 0.66
MMP28-204ENST00000615136 DTX3LQ8TDB6 740 aa19.17■□□□□ 0.66
MMP28-204ENST00000615136 BRSK1Q8TDC3 778 aa19.17■□□□□ 0.66
MMP28-204ENST00000615136 CLP1Q92989 425 aaKnown RBP19.17■□□□□ 0.66
MMP28-204ENST00000615136 DDX50Q9BQ39 737 aaKnown RBP19.17■□□□□ 0.66
MMP28-204ENST00000615136 ANGPTL2Q9UKU9 493 aa19.17■□□□□ 0.66
MMP28-204ENST00000615136 RAP2CQ9Y3L5 183 aa19.17■□□□□ 0.66
MMP28-204ENST00000615136 K7ERQ8 282 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 CCNT2O60583 730 aaKnown RBP19.16■□□□□ 0.66
MMP28-204ENST00000615136 LRG1P02750 347 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 CCR2P41597 374 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 LBX1P52954 281 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 RFTN1Q14699 578 aaPredicted RBP19.16■□□□□ 0.66
MMP28-204ENST00000615136 C1orf146Q5VVC0 180 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 LRRC8EQ6NSJ5 796 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 APCDD1Q8J025 514 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 KREMEN2Q8NCW0 462 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 SCYL1Q96KG9 808 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 TCF25Q9BQ70 676 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 ILKAPQ9H0C8 392 aaPredicted RBP19.16■□□□□ 0.66
MMP28-204ENST00000615136 CFAP97Q9P2B7 532 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 XPR1Q9UBH6 696 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 LHX3Q9UBR4 397 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 VPS28Q9UK41 221 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 FCF1Q9Y324 198 aaKnown RBP19.16■□□□□ 0.66
MMP28-204ENST00000615136 WASF2Q9Y6W5 498 aa19.16■□□□□ 0.66
MMP28-204ENST00000615136 MYO7AQ13402 2215 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 MATN2O00339 956 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CCL16O15467 120 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CDKN2DP55273 166 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 TRAF2Q12933 501 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 TRIM68Q6AZZ1 485 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 FAM217AQ8IXS0 508 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 GPR65Q8IYL9 337 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 KIRREL3Q8IZU9 778 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 PHTF2Q8N3S3 785 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 HJURPQ8NCD3 748 aaPredicted RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 CALML6Q8TD86 181 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 HEXDCQ8WVB3 486 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 MIEF2Q96C03 454 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 RMDN1Q96DB5 314 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CORO1BQ9BR76 489 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 IGSF5Q9NSI5 407 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 VPS51Q9UID3 782 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 MAFFQ9ULX9 164 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CRYL1Q9Y2S2 319 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 ZBTB14O43829 449 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 LATS1O95835 1130 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 SLC4A1P02730 911 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CHRNGP07510 517 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 NCF2P19878 526 aaPredicted RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 MPSTP25325 297 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 GRIA4P48058 902 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 POU4F1Q01851 419 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 ATXN7L2Q5T6C5 722 aaPredicted RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 HECTD2Q5U5R9 776 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 PGM2L1Q6PCE3 622 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 LPCAT1Q8NF37 534 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 ACTRT2Q8TDY3 377 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 SCG3Q8WXD2 468 aaKnown RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 MRPS31Q92665 395 aaKnown RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 SLC46A2Q9BY10 475 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.15■□□□□ 0.66
MMP28-204ENST00000615136 ASB3Q9Y575 518 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 RAI2Q9Y5P3 530 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 PDE4DIPQ5VU43 2346 aa19.15■□□□□ 0.66
MMP28-204ENST00000615136 ALPK3Q96L96 1907 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 CHD9Q3L8U1 2897 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 DCXO43602 365 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 CRABP2P29373 138 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 PLPP4Q5VZY2 271 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 ANO7Q6IWH7 933 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 ZNF549Q6P9A3 640 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 TMEM207Q6UWW9 146 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 TPGS1Q6ZTW0 290 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 PIM3Q86V86 326 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 LMNTD2Q8IXW0 634 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 ANKRD49Q8WVL7 239 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 SGF29Q96ES7 293 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 LBHD1Q9BQE6 289 aaPredicted RBP19.14■□□□□ 0.65
MMP28-204ENST00000615136 TCF7L2Q9NQB0 619 aa19.14■□□□□ 0.65
MMP28-204ENST00000615136 E9PBE3 544 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 HDAC3O15379 428 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 DLX3O60479 287 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 KLHL41O60662 606 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 RPP40O75818 363 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 SMNDC1O75940 238 aaKnown RBP eCLIP19.13■□□□□ 0.65
MMP28-204ENST00000615136 ANPEPP15144 967 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CDC25CP30307 473 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 RPL14P50914 215 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 CLCN5P51795 746 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 ZNF140P52738 457 aaPredicted RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 AP2B1P63010 937 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CREMQ03060 361 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 KLF10Q13118 480 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 PRKAA1Q13131 559 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CDH18Q13634 790 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 CSHL1Q14406 222 aa19.13■□□□□ 0.65
MMP28-204ENST00000615136 ZRSR2Q15696 482 aaKnown RBP19.13■□□□□ 0.65
MMP28-204ENST00000615136 PPFIBP2Q8ND30 876 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms