RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 CLP1Q92989 425 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 AASDHPPTQ9NRN7 309 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 TRMT13Q9NUP7 481 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 PCDHGB3Q9Y5G1 929 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 IRAK3Q9Y616 596 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 MAP2P11137 1827 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 TMEM150BA6NC51 233 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 ERCC2P18074 760 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 GALNT3Q14435 633 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC25A52Q3SY17 297 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 EFCAB3Q8N7B9 438 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 PIK3C3Q8NEB9 887 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 C3orf14Q9HBI5 128 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SEMA3GQ9NS98 782 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 ZMPSTE24O75844 475 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 ADSLP30566 484 aaPredicted RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 FAUP35544 74 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 RIPK1Q13546 671 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 NOMO1Q15155 1222 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 CCDC59Q9P031 241 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 MRTO4Q9UKD2 239 aaKnown RBP17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 AKIRIN2Q53H80 203 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 RAET1GQ6H3X3 334 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 IRF2BP2Q7Z5L9 587 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 CDYL2Q8N8U2 506 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 COPS8Q99627 209 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC27A6Q9Y2P4 619 aa17.43■□□□□ 0.38
HMGXB3-206ENST00000613459 PQBP1O60828 265 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 TBL1XO60907 577 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PPM1AP35813 382 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ABL2P42684 1182 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ATN1P54259 1190 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PFKPQ01813 784 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PTP4A2Q12974 167 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 USP41Q3LFD5 358 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ALYREFQ86V81 257 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 BEND7Q8N7W2 519 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ZNF248Q8NDW4 579 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 C7orf26Q96N11 449 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 LMAN2LQ9H0V9 348 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 S100A14Q9HCY8 104 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 RBM47A0AV96 593 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 G3V2T6 193 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 NTRK1P04629 796 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC6A2P23975 617 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 LSM3P62310 102 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 RPTNQ6XPR3 784 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 BRD9Q9H8M2 597 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PNPLA8Q9NP80 782 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 H3BNX3 289 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 SERPINA1P01009 418 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 GOT1P17174 413 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ASMTP46597 345 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 TAPT1Q6NXT6 567 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 MON1AQ86VX9 555 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 DSELQ8IZU8 1212 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 EXD2Q9NVH0 621 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 SQORQ9Y6N5 450 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 A0A1W2PRG6 482 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 DHX15O43143 795 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 OR10H2O60403 315 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 CHRNGP07510 517 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 HTR1BP28222 390 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ARMCX6Q7L4S7 300 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 GJD3Q8N144 294 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PQLC1Q8N2U9 271 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC44A1Q8WWI5 657 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PPCDCQ96CD2 204 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 OR52E6Q96RD3 313 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 HSD17B14Q9BPX1 270 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 MRPS33Q9Y291 106 aaKnown RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 TRAF6Q9Y4K3 522 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ATRNO75882 1429 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PRMT5O14744 637 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 SLC25A12O75746 678 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 HDCP19113 662 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 PARP15Q460N3 678 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 LACTB2Q53H82 288 aaPredicted RBP17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 CCDC157Q569K6 752 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ZNF180Q9UJW8 692 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 ZNF780BQ9Y6R6 833 aa17.42■□□□□ 0.38
HMGXB3-206ENST00000613459 TBC1D3BA6NDS4 549 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 H3BNH8 94 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 OR10H3O60404 316 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 NRP2O60462 931 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 S100A1P23297 94 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 GPD2P43304 727 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 FBXO42Q6P3S6 717 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 SLCO6A1Q86UG4 719 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 C10orf107Q8IVU9 208 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 IRGQQ8WZA9 623 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 HPS1Q92902 700 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 LINGO1Q96FE5 620 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 TTLL2Q9BWV7 592 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 TMEM165Q9HC07 324 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 CHST10O43529 356 aa17.41■□□□□ 0.38
HMGXB3-206ENST00000613459 PNLIPRP1P54315 467 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms