RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MAN1A1P33908 653 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 PTPN9P43378 593 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 HDAC4P56524 1084 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 MC1RQ01726 317 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 PEX6Q13608 980 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 PNCKQ6P2M8 343 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 KDELC2Q7Z4H8 507 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 NOP9Q86U38 636 aaKnown RBP17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 NRROSQ86YC3 692 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 JOSD2Q8TAC2 188 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 STARD8Q92502 1023 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 NTAN1Q96AB6 310 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 CATSPERBQ9H7T0 1116 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 PHPT1Q9NRX4 125 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 TRNAU1APQ9NX07 287 aaKnown RBP17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 KCNK4Q9NYG8 393 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 TMEM9Q9P0T7 183 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 PLEKHB1Q9UF11 243 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 TP53TG5Q9Y2B4 290 aa17.22■□□□□ 0.35
CSNK1E-215ENST00000612795 IGHV1OR21-1A0A087WYE8 117 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 A8MX80 341 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 CREB3O43889 395 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 BUB1BO60566 1050 aaPredicted RBP17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 MMEP08473 750 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 MAP4P27816 1152 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 NOP2P46087 812 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 CD97P48960 835 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 C16orf46Q6P387 395 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 DPPA4Q7L190 304 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 SLFN11Q7Z7L1 901 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 HEATR4Q86WZ0 1026 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 PYROXD2Q8N2H3 581 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 TEX19Q8NA77 164 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 NUS1Q96E22 293 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 AHCYL2Q96HN2 611 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 FHOD1Q9Y613 1164 aa17.21■□□□□ 0.35
CSNK1E-215ENST00000612795 ZNF106Q9H2Y7 1883 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 LOC101059948A0A1B0GTJ6 334 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 C2CD4BA6NLJ0 364 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 PPM1DO15297 605 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 AGFG2O95081 481 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 TCN2P20062 427 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 COPB1P53618 953 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 MLLT10P55197 1068 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 POLR2LP62875 67 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 GPLD1P80108 840 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 BCL2L1Q07817 233 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 MAN2A1Q16706 1144 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 SNAP47Q5SQN1 464 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 TMEM71Q6P5X7 295 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 CEACAM20Q6UY09 585 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 SRLQ86TD4 932 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 NAGSQ8N159 534 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 PELI3Q8N2H9 469 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 EPS8L1Q8TE68 723 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 CTRCQ99895 268 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 C11orf70Q9BRQ4 267 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 PDFQ9HBH1 243 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 SUFUQ9UMX1 484 aa17.2■□□□□ 0.34
CSNK1E-215ENST00000612795 GOLGA6CA6NDK9 693 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 GOLGA6BA6NDN3 693 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 ENO4A6NNW6 628 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 KRT7P08729 469 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 GOLGA6DP0CG33 693 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 GM2AP17900 193 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 RGRP47804 291 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 ABHD18Q0P651 414 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 TPD52L1Q16890 204 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 AFMIDQ63HM1 303 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 SCYL2Q6P3W7 929 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 UMODL1-AS1Q8N2C9 162 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 BMPERQ8N8U9 685 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 CENPIQ92674 756 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 GOLGA6AQ9NYA3 693 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 KCTD3Q9Y597 815 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 UNC79Q9P2D8 2635 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 CREBBPQ92793 2442 aa17.19■□□□□ 0.34
CSNK1E-215ENST00000612795 CACNA1DQ01668 2161 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 A8MU76 341 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 J3KR12 359 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 FGF10O15520 208 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 CEACAM5P06731 702 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 NR1D1P20393 614 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 GPD1P21695 349 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 MMP8P22894 467 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 ACTR1BP42025 376 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 ACTR1AP61163 376 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 CTBSQ01459 385 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 SQSTM1Q13501 440 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 DENND2CQ68D51 928 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 TSEN2Q8NCE0 465 aaKnown RBP17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 OR10G6Q8NH81 332 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 ECHDC3Q96DC8 303 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 SLC38A3Q99624 504 aa17.18■□□□□ 0.34
CSNK1E-215ENST00000612795 ZPBPQ9BS86 351 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms