RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PELI3Q8N2H9 469 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 PTGR2Q8N8N7 351 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 DCBLD1Q8N8Z6 715 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 CEP70Q8NHQ1 597 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 FAM110BQ8TC76 370 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 RMDN1Q96DB5 314 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 MAELQ96JY0 434 aaKnown RBP14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZNF512Q96ME7 567 aaPredicted RBP14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 SLC30A3Q99726 388 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 PDFQ9HBH1 243 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 TMEM161AQ9NX61 479 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 STK39Q9UEW8 545 aa14.1□□□□□ -0.15
PCDHGA3-202ENST00000612467 E7ENX8 843 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 SYN3O14994 580 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 SLC7A4O43246 635 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 GLP2RO95838 553 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 FGFR3P22607 806 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 SH3BP2P78314 561 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 GK3PQ14409 553 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 MDGA1Q8NFP4 955 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 CALML6Q8TD86 181 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 TADA1Q96BN2 335 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 IL1RL2Q9HB29 575 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 BTRCQ9Y297 605 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 TRAF6Q9Y4K3 522 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 MYOCOSA0A1B0GUC4 107 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 F5H5T6 163 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 CBX4O00257 560 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 OR1I1O60431 355 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 WISP3O95389 354 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 CD1DP15813 335 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 SOX11P35716 441 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 MAGEA11P43364 429 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 GPR17Q13304 367 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZRSR2Q15696 482 aaKnown RBP14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZNF678Q5SXM1 525 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 LHX8Q68G74 356 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 KLC3Q6P597 504 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 LRRC49Q8IUZ0 686 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 OR4K2Q8NGD2 314 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 RANBP9Q96S59 729 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 CCDC28BQ9BUN5 200 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 KLHL4Q9C0H6 718 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 SCOCQ9UIL1 159 aa14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.09□□□□□ -0.15
PCDHGA3-202ENST00000612467 GALTP07902 379 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 ALDOCP09972 364 aaKnown RBP14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 OR1D2P34982 312 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 CCL23P55773 120 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 DNAJB13P59910 316 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 ACAP2Q15057 778 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 GEN1Q17RS7 908 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 SCIMPQ6UWF3 145 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 EFHBQ8N7U6 833 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 RAET1EQ8TD07 263 aa14.08□□□□□ -0.15
PCDHGA3-202ENST00000612467 PRRC2BQ5JSZ5 2229 aaKnown RBP14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 UBDO15205 165 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 SNAP91O60641 907 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 RPLP2P05387 115 aaKnown RBP14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 GNA12Q03113 381 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 PARP15Q460N3 678 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 SETMARQ53H47 684 aaPredicted RBP14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 PAQR3Q6TCH7 311 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 CYP2R1Q6VVX0 501 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 SPATA24Q86W54 205 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 TRPC4APQ8TEL6 797 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 CDKN2AIPNLQ96HQ2 116 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 RNF38Q9H0F5 515 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 EFCAB1Q9HAE3 211 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 SRRDQ9UH36 339 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 PCDHGA7Q9Y5G6 932 aa14.08□□□□□ -0.16
PCDHGA3-202ENST00000612467 C2orf78A6NCI8 922 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 GOLGA8CPA6NN73 597 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 SEC24AO95486 1093 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 INHAP05111 366 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 MTHFD2P13995 350 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 CHRM3P20309 590 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 FDXRP22570 491 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 PMLP29590 882 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 PRDX3P30048 256 aaKnown RBP14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 ALDH1A3P47895 512 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 GRB7Q14451 532 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 PGAM4Q8N0Y7 254 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 LPCAT1Q8NF37 534 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 OR4L1Q8NH43 312 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 PKP2Q99959 881 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 SEMA6AQ9H2E6 1030 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 MID1IP1Q9NPA3 183 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 LRFN2Q9ULH4 789 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 MAGEA13PA6NCF6 341 aa14.07□□□□□ -0.16
PCDHGA3-202ENST00000612467 TRPC5OSA6NMA1 111 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms