RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OR13J1Q8NGT2 312 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 TREX1Q9NSU2 369 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 NDUFA13Q9P0J0 144 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 OAZ3Q9UMX2 235 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CEPT1Q9Y6K0 416 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 A0A087X1B8 175 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 H6PDO95479 791 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 COL6A2P12110 1019 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 AXLP30530 894 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 KPNA2P52292 529 aaKnown RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 NEDD8Q15843 81 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 CHERPQ8IWX8 916 aaKnown RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 MAGEE2Q8TD90 523 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-207ENST00000612273 IL12RB2Q99665 862 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 OLAHQ9NV23 265 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 THEGQ9P2T0 379 aa14.07□□□□□ -0.16
COL6A1-207ENST00000612273 KPNA6O60684 536 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 FMO4P31512 558 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 C16orf72Q14CZ0 275 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 SAMD4BQ5PRF9 694 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 CILP2Q8IUL8 1156 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 TTC9BQ8N6N2 239 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 MIPOL1Q8TD10 442 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 ERLEC1Q96DZ1 483 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 CDK15Q96Q40 435 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 SEMA3CQ99985 751 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 SPON2Q9BUD6 331 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 RBM38Q9H0Z9 239 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF696Q9H7X3 374 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 SMOXQ9NWM0 555 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 RSL24D1Q9UHA3 163 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 COMMD10Q9Y6G5 202 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 RBM47A0AV96 593 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 B4GAT1O43505 415 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 CDK14O94921 469 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 RBP1P09455 135 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 AGTR2P50052 363 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 PFKPQ01813 784 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 YWHAHQ04917 246 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 UNC50Q53HI1 259 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 RALGPS2Q86X27 583 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 TWIST2Q8WVJ9 160 aa14.06□□□□□ -0.16
COL6A1-207ENST00000612273 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
COL6A1-207ENST00000612273 GPR39O43194 453 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 NR4A1P22736 598 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ADRA1AP35348 466 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ACVRL1P37023 503 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ADARP55265 1226 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 HPCAP84074 193 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 MAPRE2Q15555 327 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 OR4D1Q15615 310 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 INTS6LQ5JSJ4 861 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 PIK3R6Q5UE93 754 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 KIAA0930Q6ICG6 404 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SCD5Q86SK9 330 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 TEX37Q96LM6 180 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 RPRD1AQ96P16 312 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 DHRS12A0PJE2 317 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ODC1P11926 461 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 GGT5P36269 586 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 THPOP40225 353 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 FRG1Q14331 258 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 HERC3Q15034 1050 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 TBC1D25Q3MII6 688 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SIRPB2Q5JXA9 342 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF678Q5SXM1 525 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 GPR107Q5VW38 600 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 LIMS2Q7Z4I7 341 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 FIBCD1Q8N539 461 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ATAD1Q8NBU5 361 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 PTPN18Q99952 460 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 MUC3BQ9H195 1237 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SLC38A7Q9NVC3 462 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SUCOQ9UBS9 1254 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 EI24O14681 340 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 TRIM24O15164 1050 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 AP1G1O43747 822 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 GOT2P00505 430 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SLC7A1P30825 629 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ENTPD1P49961 510 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 AIF1P55008 147 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 CDC42EP1Q00587 391 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 NFYCQ13952 458 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 SEMA3AQ14563 771 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 TIGD2Q4W5G0 525 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 XKR4Q5GH76 650 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 DRAXINQ8NBI3 349 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 OR2T34Q8NGX1 318 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 OR2T3Q8NH03 318 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 DPF3Q92784 378 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 NOL6Q9H6R4 1146 aaKnown RBP14.05□□□□□ -0.16
COL6A1-207ENST00000612273 MEAF6Q9HAF1 191 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 NDUFAF1Q9Y375 327 aa14.05□□□□□ -0.16
COL6A1-207ENST00000612273 ZNF711Q9Y462 761 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms