RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ANKRD22Q5VYY1 191 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 FBXL19Q6PCT2 694 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NCEH1Q6PIU2 408 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NPNTQ6UXI9 565 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CYP2U1Q7Z449 544 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 SYT12Q8IV01 421 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 DEFB119Q8N690 84 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 DNASE2BQ8WZ79 361 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 RAB7BQ96AH8 199 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 VOPP1Q96AW1 172 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 HSPA12BQ96MM6 686 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 KLHL32Q96NJ5 620 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NUDCD1Q96RS6 583 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 LGMNQ99538 433 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 POLR1EQ9GZS1 481 aaKnown RBP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 ARRDC1-AS1Q9H2J1 176 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 C6orf106Q9H6K1 298 aaPredicted RBP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 ATP13A3Q9H7F0 1226 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 C10orf88Q9H8K7 445 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 USP29Q9HBJ7 922 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NT5MQ9NPB1 228 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CABIN1Q9Y6J0 2220 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3DA0A087WVF3 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3IA0A087WXS9 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3EA0A087X179 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3KA0A087X1G2 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 A0A1W2PQ67 120 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TMEM120BA0PK00 339 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CFAP69A5D8W1 941 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3FA6NER0 549 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MEI4A8MW99 385 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 HACD1B0YJ81 288 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 C10orf142B7Z368 130 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3LB9A6J9 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 RNF103O00237 685 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PLK4O00444 970 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 INSIG1O15503 277 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MTSS1O43312 755 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3HP0C7X1 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ADRB3P13945 408 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CREB1P16220 341 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CR2P20023 1033 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SERPINA4P29622 427 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MPLP40238 635 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 CCR5P51681 352 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SUOXP51687 545 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FOXK1P85037 733 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PPARDQ03181 441 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 BCL2L1Q07817 233 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PDIA2Q13087 525 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 XRCC4Q13426 336 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 DSG2Q14126 1118 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 MPP2Q14168 576 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PLA2G2CQ5R387 149 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FNBP1LQ5T0N5 605 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PEAR1Q5VY43 1037 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 KIAA0895LQ68EN5 471 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3GQ6DHY5 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3CQ6IPX1 549 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 BRAT1Q6PJG6 821 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PARS2Q7L3T8 475 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ARMCX6Q7L4S7 300 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 RABEPKQ7Z6M1 372 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ZBED8Q8IZ13 594 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 RGL4Q8IZJ4 473 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TBC1D3Q8IZP1 549 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PGBD5Q8N414 524 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PIGKQ92643 395 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SEC16BQ96JE7 1060 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PREBQ9HCU5 417 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SCUBE2Q9NQ36 999 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SUSD2Q9UGT4 822 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SLC24A2Q9UI40 661 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PILRBQ9UKJ0 227 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 EXOC1LA0A1B0GW35 172 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TCRBV7S3A2A0A539 114 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TSPAN11A1L157 253 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FAM47DPA6NHR8 397 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 KCNK1O00180 336 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 AP1G1O43747 822 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FOXD2O60548 495 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 SOCS5O75159 536 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ZNF189O75820 626 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 TMEM63AO94886 807 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 FSBPO95073 299 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 PIGNO95427 931 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 JCHAINP01591 159 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ZNF806P0C7X5 589 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 BRAFP15056 766 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 GNSP15586 552 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 XPAP23025 273 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-217ENST00000611848 ITPKAP23677 461 aa8.87□□□□□ -0.99
SMAD4-217ENST00000611848 NUDT1P36639 197 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms