RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 ISOC1Q96CN7 298 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 SLC45A3Q96JT2 553 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 FAM210AQ96ND0 272 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 RTP3Q9BQQ7 232 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 TRIM15Q9C019 465 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 SFMBT1Q9UHJ3 866 aa17.08■□□□□ 0.33
EWSR1-221ENST00000610553 MRPL42Q9Y6G3 142 aaKnown RBP17.08■□□□□ 0.33
EWSR1-221ENST00000610553 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 PAPSS2O95340 614 aaPredicted RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 UGT1A6P19224 532 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 PCSK1P29120 753 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 SERPINH1P50454 418 aaKnown RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 SH3BP2P78314 561 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 PLOD1Q02809 727 aaPredicted RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 KIF19Q2TAC6 998 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 GPR141Q7Z602 305 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 CLYBLQ8N0X4 340 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 MINDY1Q8N5J2 469 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 FNDC8Q8TC99 324 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 PTERQ96BW5 349 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 FCRL2Q96LA5 508 aaPredicted RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 SLC25A51Q9H1U9 297 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 POLR3BQ9NW08 1133 aaPredicted RBP17.08■□□□□ 0.32
EWSR1-221ENST00000610553 AURKCQ9UQB9 309 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 NDUFAF1Q9Y375 327 aa17.08■□□□□ 0.32
EWSR1-221ENST00000610553 BDNFP23560 247 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 NUP107P57740 925 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 BNIP2Q12982 314 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 GRB14Q14449 540 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 INPP5AQ14642 412 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 ZBED5Q49AG3 693 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 GPR180Q86V85 440 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 PIM3Q86V86 326 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 ZNF786Q8N393 782 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
EWSR1-221ENST00000610553 SH3RF2Q8TEC5 729 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 EBF1Q9UH73 591 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 ZNHIT2Q9UHR6 403 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 DNAH12Q6ZR08 3092 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 SLC7A4O43246 635 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 PEX11BO96011 259 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 PSMA4P25789 261 aaKnown RBP17.07■□□□□ 0.32
EWSR1-221ENST00000610553 CCT8P50990 548 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 MERTKQ12866 999 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 SLC36A3Q495N2 470 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 VPS26BQ4G0F5 336 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 TTC33Q6PID6 262 aaPredicted RBP17.07■□□□□ 0.32
EWSR1-221ENST00000610553 GPR142Q7Z601 462 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 SPPL2CQ8IUH8 684 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 IMP4Q96G21 291 aaKnown RBP17.07■□□□□ 0.32
EWSR1-221ENST00000610553 FEM1CQ96JP0 617 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 IL1RL2Q9HB29 575 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 ACTR3BQ9P1U1 418 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 PTGDR2Q9Y5Y4 395 aa17.07■□□□□ 0.32
EWSR1-221ENST00000610553 PATJQ8NI35 1801 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 FAM149AA5PLN7 773 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 MSI1O43347 362 aaKnown RBP17.06■□□□□ 0.32
EWSR1-221ENST00000610553 CDK14O94921 469 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 S1PR4O95977 384 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 MYL3P08590 195 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 FGF4P08620 206 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 SLC6A2P23975 617 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 OXTRP30559 389 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 CCR1P32246 355 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 STT3AP46977 705 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 CDH13P55290 713 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 ESRRGP62508 458 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 ATP6AP1Q15904 470 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
EWSR1-221ENST00000610553 CLVS1Q8IUQ0 354 aaPredicted RBP17.06■□□□□ 0.32
EWSR1-221ENST00000610553 LRRC49Q8IUZ0 686 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 ADGRG5Q8IZF4 528 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 BBS5Q8N3I7 341 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 SCAMP5Q8TAC9 235 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.06■□□□□ 0.32
EWSR1-221ENST00000610553 MYRFLQ96LU7 910 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 GAD1Q99259 594 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 MFSD1Q9H3U5 465 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 SMOC2Q9H3U7 446 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 CMTM6Q9NX76 183 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 EGFL7Q9UHF1 273 aa17.06■□□□□ 0.32
EWSR1-221ENST00000610553 MROH6A6NGR9 719 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 PIP5K1BO14986 540 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 MATN4O95460 622 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 THP07101 528 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 C7P10643 843 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 FASP25445 335 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 ARSDP51689 593 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 YBX1P67809 324 aaKnown RBP17.05■□□□□ 0.32
EWSR1-221ENST00000610553 TMED1Q13445 227 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 DUS1LQ6P1R4 473 aaKnown RBP17.05■□□□□ 0.32
EWSR1-221ENST00000610553 CROCCP3Q8IVE0 287 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 MIER2Q8N344 545 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 TWIST2Q8WVJ9 160 aa17.05■□□□□ 0.32
EWSR1-221ENST00000610553 C12orf43Q96C57 262 aaKnown RBP17.05■□□□□ 0.32
EWSR1-221ENST00000610553 HSPBAP1Q96EW2 488 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms