RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ARHGAP12Q8IWW6 846 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 GSTO2Q9H4Y5 243 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 PSME4Q14997 1843 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 LTBP3Q9NS15 1303 aa20.43■□□□□ 0.86
SSBP3-216ENST00000610401 ANXA9O76027 345 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 PARNO95453 639 aaKnown RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 TBX18O95935 607 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 IST1P53990 364 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 UBXN11Q5T124 520 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 ERI1Q8IV48 349 aaKnown RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 SLC15A3Q8IY34 581 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 GPRC5AQ8NFJ5 357 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 CASP10Q92851 521 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 EXOC2Q96KP1 924 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 MROH8Q9H579 483 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 HAPLN1P10915 354 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 SH3BGRP55822 239 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 YWHAHQ04917 246 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 NFYCQ13952 458 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 TIGD2Q4W5G0 525 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 C16orf87Q6PH81 154 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 UTS2BQ765I0 119 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 OR10Q1Q8NGQ4 319 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 OR13C4Q8NGS5 318 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 PLEKHG4BQ96PX9 1271 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 CMTM6Q9NX76 183 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 DGKBQ9Y6T7 804 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 SUPT3HB4E1H0 165 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 MTSS1O43312 755 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 C8BP07358 591 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 IL10P22301 178 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 PSMA4P25789 261 aaKnown RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 PNPLA4P41247 253 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 MERTKQ12866 999 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 POLD3Q15054 466 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 PTPRRQ15256 657 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 C2CD4AQ8NCU7 369 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-216ENST00000610401 TWIST2Q8WVJ9 160 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 DNAI2Q9GZS0 605 aa20.42■□□□□ 0.86
SSBP3-216ENST00000610401 NPHS1O60500 1241 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 GRIK1P39086 918 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 FRG1Q14331 258 aaKnown RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 MAPRE2Q15555 327 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 MAELQ96JY0 434 aaKnown RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 RANBP9Q96S59 729 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 TIMMDC1Q9NPL8 285 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 VPS28Q9UK41 221 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 NDUFAF1Q9Y375 327 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 FADS3Q9Y5Q0 445 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 CNTN5O94779 1100 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 FASP25445 335 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 GJA5P36382 358 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 MAGEA10P43363 369 aaPredicted RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 AGTR2P50052 363 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 TXNL4AP83876 142 aaKnown RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 HERC3Q15034 1050 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 TIGD5Q53EQ6 642 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 AARS2Q5JTZ9 985 aaKnown RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 DNAJC14Q6Y2X3 702 aaPredicted RBP20.41■□□□□ 0.86
SSBP3-216ENST00000610401 KCTD8Q6ZWB6 473 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 TFAP2CQ92754 450 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 TMEM181Q9P2C4 612 aa20.41■□□□□ 0.86
SSBP3-216ENST00000610401 C1orf232A0A0U1RR37 186 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 IHHQ14623 411 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 UNC50Q53HI1 259 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 ANKRD34AQ69YU3 496 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 PCYOX1LQ8NBM8 494 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 MEAF6Q9HAF1 191 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 CNGB3Q9NQW8 809 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 NSMCE4AQ9NXX6 385 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 UXTQ9UBK9 157 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-216ENST00000610401 CD300AQ9UGN4 299 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 TRIP12Q14669 1992 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-216ENST00000610401 TCRBV3S1A0A5B6 114 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 ARPC2O15144 300 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 CDK14O94921 469 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 POU4F1Q01851 419 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 TBPL2Q6SJ96 375 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 ISCA2Q86U28 154 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 LRRTM3Q86VH5 581 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 PSMG2Q969U7 264 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 WARS2Q9UGM6 360 aaKnown RBP20.4■□□□□ 0.86
SSBP3-216ENST00000610401 ZBTB11O95625 1053 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-216ENST00000610401 RFTN1Q14699 578 aaPredicted RBP20.4■□□□□ 0.86
SSBP3-216ENST00000610401 OR4D1Q15615 310 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 IMPG1Q17R60 797 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 PYCR3Q53H96 274 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 DGCR6LQ9BY27 220 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 PLK2Q9NYY3 685 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 DERAQ9Y315 318 aa20.4■□□□□ 0.86
SSBP3-216ENST00000610401 DLGAP1O14490 977 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 SCAMP3O14828 347 aaKnown RBP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 WARSP23381 471 aaKnown RBP20.39■□□□□ 0.85
SSBP3-216ENST00000610401 HADHAP40939 763 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 GEMP55040 296 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 LAPTM5Q13571 262 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 RAB39AQ14964 217 aa20.39■□□□□ 0.85
SSBP3-216ENST00000610401 UGT3A2Q3SY77 523 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms