RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LSM7Q9UK45 103 aaKnown RBP11.96□□□□□ -0.49
USP6NL-206ENST00000609853 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 RAI2Q9Y5P3 530 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 COMMD10Q9Y6G5 202 aa11.96□□□□□ -0.49
USP6NL-206ENST00000609853 CCNT2O60583 730 aaKnown RBP11.95□□□□□ -0.5
USP6NL-206ENST00000609853 TBL1XO60907 577 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 GJB3O75712 270 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 ZMPSTE24O75844 475 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 BAIAP3O94812 1187 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 TMCC1O94876 653 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
USP6NL-206ENST00000609853 PSMG1O95456 288 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 IRF1P10914 325 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 HDCP19113 662 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 MAPK8P45983 427 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 RGRP47804 291 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 TTPAP49638 278 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 SGSHP51688 502 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 PGGT1BP53609 377 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 ATP6V0D1P61421 351 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 AP1S1P61966 158 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 ARF5P84085 180 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 BTKQ06187 659 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 CCDC6Q16204 474 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 CMPK2Q5EBM0 449 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 AARS2Q5JTZ9 985 aaKnown RBP11.95□□□□□ -0.5
USP6NL-206ENST00000609853 MPP7Q5T2T1 576 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF549Q6P9A3 640 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 NCEH1Q6PIU2 408 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 Q6ZNB5 142 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 FRMD7Q6ZUT3 714 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 TMEM150AQ86TG1 271 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 RNF135Q8IUD6 432 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 SPATA6LQ8N4H0 392 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 CEP70Q8NHQ1 597 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 FBXO27Q8NI29 283 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 FEM1AQ9BSK4 669 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
USP6NL-206ENST00000609853 MAN1C1Q9NR34 630 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 TAS2R13Q9NYV9 303 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 CRYL1Q9Y2S2 319 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 LRRC42Q9Y546 428 aa11.95□□□□□ -0.5
USP6NL-206ENST00000609853 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
USP6NL-206ENST00000609853 A0A088AWK7 358 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 H7C0S8 307 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ZBTB14O43829 449 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 TSPAN3O60637 253 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LILRB3O75022 631 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 FKBP6O75344 327 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 NDUFS3O75489 264 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 TIMP1P01033 207 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PYGLP06737 847 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CD1DP15813 335 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF37AP17032 561 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 RPL26P61254 145 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SLC34A1Q06495 639 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 GPR158Q5T848 1215 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 RETSATQ6NUM9 610 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 AAGABQ6PD74 315 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 C16orf59Q7L2K0 433 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LDB1Q86U70 411 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CPXM2Q8N436 756 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CARNMT1Q8N4J0 409 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 DCAF4L2Q8NA75 395 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 OR4K2Q8NGD2 314 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 AGR3Q8TD06 166 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ANKRD49Q8WVL7 239 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LPGAT1Q92604 370 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 MRPS31Q92665 395 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ACDQ96AP0 544 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SGF29Q96ES7 293 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 C2orf49Q9BVC5 232 aaPredicted RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 NUF2Q9BZD4 464 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ZNF385DQ9H6B1 395 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 IL21Q9HBE4 155 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 MCM8Q9UJA3 840 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 VPS28Q9UK41 221 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ANGPTL2Q9UKU9 493 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 TMCO1Q9UM00 188 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 SPO11Q9Y5K1 396 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 OR51B4Q9Y5P0 310 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 LCHNA4D1U4 455 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CCL22O00626 93 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 GREM1O60565 184 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PIK3R1P27986 724 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 EPHA3P29320 983 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 PTDSS1P48651 473 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CSNK1DP48730 415 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 CLCN4P51793 760 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 INHBCP55103 352 aa11.94□□□□□ -0.5
USP6NL-206ENST00000609853 ADARP55265 1226 aaKnown RBP11.94□□□□□ -0.5
USP6NL-206ENST00000609853 WDR5P61964 334 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms