RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 INPP5AQ14642 412 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
HDDC2-209ENST00000609477 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 TECPR1Q7Z6L1 1165 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.29□□□□□ -0.12
HDDC2-209ENST00000609477 CCHCR1Q8TD31 782 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 NUS1Q96E22 293 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 DTD2Q96FN9 168 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 TRIB3Q96RU7 358 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 HERPUD2Q9BSE4 406 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 APOOQ9BUR5 198 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 CEP41Q9BYV8 373 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 CDH19Q9H159 772 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 MAGEE1Q9HCI5 957 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 CSNK1G3Q9Y6M4 447 aa14.29□□□□□ -0.12
HDDC2-209ENST00000609477 LOC285095A0A1B0GVY8 99 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 A8MX80 341 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-209ENST00000609477 TNFRSF10CO14798 259 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 TNFSF14O43557 240 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 PIAS2O75928 621 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 ANXA9O76027 345 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 NDST3O95803 873 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 ADRB1P08588 477 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 CDK4P11802 303 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 CTPS1P17812 591 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 GM2AP17900 193 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 CD68P34810 354 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-209ENST00000609477 KIAA1024LP59773 190 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 SEMG2Q02383 582 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 PTSQ03393 145 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 ZNF211Q13398 564 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-209ENST00000609477 NFATC4Q14934 902 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 QPCTQ16769 361 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 HS1BP3Q53T59 392 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 PRAMEF14Q5SWL7 426 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 AADACL2Q6P093 401 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 KANSL1Q7Z3B3 1105 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 LPCAT1Q8NF37 534 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 DUSP23Q9BVJ7 150 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 RAD18Q9NS91 495 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 DNAJC28Q9NX36 388 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 ZKSCAN5Q9Y2L8 839 aa14.28□□□□□ -0.12
HDDC2-209ENST00000609477 AAR2Q9Y312 384 aaKnown RBP14.28□□□□□ -0.12
HDDC2-209ENST00000609477 C5orf60A6NFR6 353 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 KCNN4O15554 427 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 MT-CYBP00156 380 aaPredicted RBP14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ALPIP09923 528 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ALPPL2P10696 532 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 NFKB1P19838 968 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 DGKAP23743 735 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 MSNP26038 577 aaKnown RBP14.27□□□□□ -0.13
HDDC2-209ENST00000609477 STIP1P31948 543 aaKnown RBP14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ETV3P41162 512 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 STC1P52823 247 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 PPARDQ03181 441 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 BNIP3Q12983 259 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 PRPSAP1Q14558 356 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ANKRD20A2Q5SQ80 823 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ANKRD20A1Q5TYW2 823 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 Q6ZVL8 140 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 HSD11B1LQ7Z5J1 315 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 TSPAN33Q86UF1 283 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 SPATA22Q8NHS9 363 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 SLC35B2Q8TB61 432 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 MAIP1Q8WWC4 291 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 LRRC45Q96CN5 670 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 WDR92Q96MX6 357 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 TEX101Q9BY14 249 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 SLC13A1Q9BZW2 595 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 GBA3Q9H227 469 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 TRABDQ9H4I3 376 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 WDR26Q9H7D7 661 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 USP29Q9HBJ7 922 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 PKD2L2Q9NZM6 624 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 SPASTQ9UBP0 616 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 RSPH14Q9UHP6 348 aa14.27□□□□□ -0.13
HDDC2-209ENST00000609477 APOBEC2Q9Y235 224 aaKnown RBP14.27□□□□□ -0.13
HDDC2-209ENST00000609477 CNOT1A5YKK6 2376 aaKnown RBP14.26□□□□□ -0.13
HDDC2-209ENST00000609477 C1orf232A0A0U1RR37 186 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 GOLGA6CA6NDK9 693 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 GOLGA6BA6NDN3 693 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 TPP1O14773 563 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 SCAMP1O15126 338 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 PMPCBO75439 489 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 PCCBP05166 539 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 C1SP09871 688 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 GOLGA6DP0CG33 693 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 MYCLP1P12525 358 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-209ENST00000609477 JUNDP17535 347 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 HLA-DPA1P20036 260 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 GEMP55040 296 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 WNT3AP56704 352 aa14.26□□□□□ -0.13
HDDC2-209ENST00000609477 SIM1P81133 766 aaPredicted RBP14.26□□□□□ -0.13
HDDC2-209ENST00000609477 IL9RQ01113 521 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms