RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 SPTLC1O15269 473 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 HNRNPLP14866 589 aaKnown RBP eCLIP21.11■□□□□ 0.975e-7■■■□□ 17.2
SH3D19-211ENST00000604030 CDKN2BP42772 138 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 MTTPP55157 894 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.11■□□□□ 0.97
SH3D19-211ENST00000604030 PIGWQ7Z7B1 504 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 ZC3H7AQ8IWR0 971 aaKnown RBP21.11■□□□□ 0.97
SH3D19-211ENST00000604030 TEX47Q8TBZ9 253 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 ST3GAL5Q9UNP4 418 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 POLR1DQ9Y2S0 133 aa21.11■□□□□ 0.97
SH3D19-211ENST00000604030 C5orf60A6NFR6 353 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 URADA6NGE7 173 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 TCEA3O75764 348 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SPIBQ01892 262 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 RNASEH2BQ5TBB1 312 aaKnown RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SLC26A9Q7LBE3 791 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 TRAPPC5Q8IUR0 188 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 KIAA0319LQ8IZA0 1049 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 PPP1R14AQ96A00 147 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SMPD4Q9NXE4 827 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SMPD3Q9NY59 655 aaPredicted RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 ZNF37AP17032 561 aaPredicted RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SP100P23497 879 aaPredicted RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 LIMK2P53671 638 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 USP4Q13107 963 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 PGLYRP2Q96PD5 576 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 EURLQ9NYK6 297 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 PTTG2Q9NZH5 202 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 GNEQ9Y223 722 aaKnown RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SH3GLB1Q9Y371 365 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 HNMTP50135 292 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 GRM3Q14832 879 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 KIFC1Q9BW19 673 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 BIKQ13323 160 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 CTBP1Q13363 440 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 HDAC10Q969S8 669 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 MTFMTQ96DP5 389 aaKnown RBP21.1■□□□□ 0.97
SH3D19-211ENST00000604030 LINGO1Q96FE5 620 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 S100A13Q99584 98 aa21.1■□□□□ 0.97
SH3D19-211ENST00000604030 SNHG28P0DPA3 235 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 ITGB5P18084 799 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 PTPN20Q4JDL3 420 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 NAT14Q8WUY8 206 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 CSPG4P5Q96PW8 444 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 FNDC11Q9BVV2 318 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 ZFP14Q9HCL3 533 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 NFKBIL1Q9UBC1 381 aaPredicted RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 RBM47A0AV96 593 aaKnown RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 GCATO75600 419 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 NR2F1P10589 423 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 SLC6A2P23975 617 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 CYP1B1Q16678 543 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 FBXL19Q6PCT2 694 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 XYLT1Q86Y38 959 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 TMEM131LA2VDJ0 1609 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 AP3D1O14617 1153 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 LINC00032P0C843 101 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 PTPN9P43378 593 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 SLCO6A1Q86UG4 719 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 JOSD2Q8TAC2 188 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 NCKAP1Q9Y2A7 1128 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 COL5A2P05997 1499 aaPredicted RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 RPP40O75818 363 aaKnown RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 TNFSF9P41273 254 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 GALNT3Q14435 633 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 SMYD1Q8NB12 490 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 IRGQQ8WZA9 623 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 CENPNQ96H22 339 aaPredicted RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 NPAS2Q99743 824 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 SDCBP2Q9H190 292 aa21.09■□□□□ 0.97
SH3D19-211ENST00000604030 RPRD1BQ9NQG5 326 aaKnown RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 EIF2B3Q9NR50 452 aaKnown RBP21.09■□□□□ 0.97
SH3D19-211ENST00000604030 KPNA3O00505 521 aaPredicted RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 HIST1H2ABP04908 130 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 ADRA1BP35368 520 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 ASMTP46597 345 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 SRP54P61011 504 aaKnown RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 FCHO2Q0JRZ9 810 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 HIST3H2AQ7L7L0 130 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 CMC1Q7Z7K0 106 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 FAM35AQ86V20 835 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 MON1AQ86VX9 555 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 HIST1H2ACQ93077 130 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 NXF3Q9H4D5 531 aaKnown RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 MPZL2O60487 215 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 TCF4P15884 667 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 SCNN1GP51170 649 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 CCR3P51677 355 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 RPL26P61254 145 aaKnown RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 MRPS6P82932 125 aaKnown RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 TIGD2Q4W5G0 525 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 XKR6Q5GH73 641 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 SVOPLQ8N434 492 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 OR52K2Q8NGK3 314 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 CLP1Q92989 425 aaKnown RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 ADAM2Q99965 735 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 DENND2DQ9H6A0 471 aaPredicted RBP21.08■□□□□ 0.97
SH3D19-211ENST00000604030 CIDEBQ9UHD4 219 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 ADGRE2Q9UHX3 823 aa21.08■□□□□ 0.97
SH3D19-211ENST00000604030 PACSIN3Q9UKS6 424 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms