RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 R3HCC1LQ7Z5L2 792 aaKnown RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 ZNF232Q9UNY5 417 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 FAM50BQ9Y247 325 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 CASKO14936 926 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 ADGRE1Q14246 886 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 HERC3Q15034 1050 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 NFE2Q16621 373 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 TNS4Q8IZW8 715 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 USP7Q93009 1102 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 ZCCHC2Q9C0B9 1178 aaKnown RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 TREM1Q9NP99 234 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 LACTBL1A8MY62 500 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 RGS10O43665 173 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 NDUFS2O75306 463 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 TM7SF2O76062 418 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 INSRRP14616 1297 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 C1orf189Q5VU69 101 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 HAGHLQ6PII5 290 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 SPATA6LQ8N4H0 392 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 GAL3ST3Q96A11 431 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 BTRCQ9Y297 605 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 VWDEQ8N2E2 1590 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 ACADMP11310 421 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 SPIBQ01892 262 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 OGFRL1Q5TC84 451 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 ITIH5Q86UX2 942 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 C10orf107Q8IVU9 208 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 PTBP2Q9UKA9 531 aaKnown RBP8.71□□□□□ -1.01
CSMD1-216ENST00000602557 GIT1Q9Y2X7 761 aa8.71□□□□□ -1.01
CSMD1-216ENST00000602557 FBP2O00757 339 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 HLA-DQA2P01906 255 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 TAF13Q15543 124 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 THAP5Q7Z6K1 395 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 PIWIL2Q8TC59 973 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ERMAPQ96PL5 475 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CADM1Q9BY67 442 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ERVK-11Q9UQG0 969 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 U3KQV3 271 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 KIAA0100Q14667 2235 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 A0A0X1KG70 313 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 LINGO3P0C6S8 592 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.024e-6■□□□□ 11.2
CSMD1-216ENST00000602557 ZNF24P17028 368 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 MYL9P24844 172 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CD86P42081 329 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 GRIA4P48058 902 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ACADVLP49748 655 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 PGDP52209 483 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 SGCGQ13326 291 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 SPATA20Q8TB22 786 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 C11orf24Q96F05 449 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 NLNQ9BYT8 704 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 MIR1-1HGQ9H1L0 117 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ABCG8Q9H221 673 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 DSN1Q9H410 356 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 MTF2Q9Y483 593 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 G3V2T6 193 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 POLD2P49005 469 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 DCDC1P59894 354 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 NAB1Q13506 487 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 HKDC1Q2TB90 917 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CCDC177Q9NQR7 707 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 RDH8Q9NYR8 311 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ARHGAP28Q9P2N2 729 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 OPTCQ9UBM4 332 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 HOXA2O43364 376 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 MTA2O94776 668 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 OR5F1O95221 314 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CRATP43155 626 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 SMARCB1Q12824 385 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 DPYSL3Q14195 570 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 FAM171A1Q5VUB5 890 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 PDGFDQ9GZP0 370 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 SAE1Q9UBE0 346 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 YARS2Q9Y2Z4 477 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 A0A1W2PPM1 405 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 PQBP1O60828 265 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 NOL4O94818 638 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 CBWD6Q4V339 395 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 TMEM214Q6NUQ4 689 aaKnown RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 DNAJB7Q7Z6W7 309 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-216ENST00000602557 SPPL2CQ8IUH8 684 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 MROH8Q9H579 483 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 ENTPD4Q9Y227 616 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 FMN2Q9NZ56 1722 aa8.71□□□□□ -1.02
CSMD1-216ENST00000602557 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 GNAO1P09471 354 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TNNI3P19429 210 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 KATNAL2Q8IYT4 538 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 NAT16Q8N8M0 369 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF398Q8TD17 642 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PIK3R3Q92569 461 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms