RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 HLTFQ14527 1009 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 IQCB1Q15051 598 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 CNGA3Q16281 694 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 C14orf28Q4W4Y0 310 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 HGSNATQ68CP4 663 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 ZNF843Q8N446 348 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 NSMCE1Q8WV22 266 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 NUS1Q96E22 293 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 DPEP2Q9H4A9 486 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 PHPT1Q9NRX4 125 aaPredicted RBP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 MOSPD1Q9UJG1 213 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 CAPN8A6NHC0 703 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 K7ENP7 123 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 NUDT21O43809 227 aaKnown RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 CPP00450 1065 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 CYP2A6P11509 494 aaPredicted RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 SERPINB6P35237 376 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 UGT1A5P35504 534 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 CDH6P55285 790 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 CFHR1Q03591 330 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 ZFP36L1Q07352 338 aaKnown RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 TRAF2Q12933 501 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 CLN3Q13286 438 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 TDRD12Q587J7 1177 aaKnown RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 MARC1Q5VT66 337 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 SPECC1LQ69YQ0 1117 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 TXNRD3NBQ6F5E7 133 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 INO80CQ6PI98 192 aaPredicted RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 LRRC49Q8IUZ0 686 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 ATPAF2Q8N5M1 289 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 NIPA2Q8N8Q9 360 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 Q8N9G6 341 aaPredicted RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 CCL4L1Q8NHW4 92 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 GPBAR1Q8TDU6 330 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 SYN2Q92777 582 aaPredicted RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 SCRN2Q96FV2 425 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17■□□□□ 0.31
SCAF1-204ENST00000601038 TEX101Q9BY14 249 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 THAP2Q9H0W7 228 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 PCDH18Q9HCL0 1135 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 LRIT1Q9P2V4 623 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 IP6K2Q9UHH9 426 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 RNF215Q9Y6U7 377 aa17■□□□□ 0.31
SCAF1-204ENST00000601038 ARHGEF17Q96PE2 2063 aaPredicted RBP17■□□□□ 0.31
SCAF1-204ENST00000601038 A0A1W2PQJ5 194 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 B4DGG1 531 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 PSMD11O00231 422 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 PGLSO95336 258 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 CCNB1P14635 433 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 SLC5A2P31639 672 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 MMP13P45452 471 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 MAXP61244 160 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
SCAF1-204ENST00000601038 ARHGEF7Q14155 803 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 DENND2CQ68D51 928 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
SCAF1-204ENST00000601038 HSD11B1LQ7Z5J1 315 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 SPRED1Q7Z699 444 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 HEATR4Q86WZ0 1026 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 SFTPA2Q8IWL1 248 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 TTC9Q92623 222 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 TMEM159Q96B96 161 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 DTD2Q96FN9 168 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 FUCA2Q9BTY2 467 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 CARS2Q9HA77 564 aaKnown RBP16.99■□□□□ 0.31
SCAF1-204ENST00000601038 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.99■□□□□ 0.31
SCAF1-204ENST00000601038 ACSL6Q9UKU0 697 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 PPIL1Q9Y3C6 166 aa16.99■□□□□ 0.31
SCAF1-204ENST00000601038 NPIPB15A6NHN6 443 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 FUCA1P04066 466 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 CYP1A2P05177 515 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 CEACAM5P06731 702 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 JMJD7P0C870 316 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 LHCGRP22888 699 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 IL4RP24394 825 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 TEAD1P28347 426 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 ETV3P41162 512 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 CDK3Q00526 305 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 ARMC12Q5T9G4 340 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 CCDC81Q6ZN84 652 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 C17orf82Q86X59 251 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 TEX26Q8N6G2 289 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 BTBD6Q96KE9 485 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 MCCC1Q96RQ3 725 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 CCNL2Q96S94 520 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 NUP85Q9BW27 656 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 GSDMCQ9BYG8 508 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 FRMD8Q9BZ67 464 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 SPATS2LQ9NUQ6 558 aaKnown RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 RCOR3Q9P2K3 495 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 ANAPC7Q9UJX3 599 aa16.98■□□□□ 0.31
SCAF1-204ENST00000601038 ATXN7L1Q9ULK2 861 aaPredicted RBP16.98■□□□□ 0.31
SCAF1-204ENST00000601038 MYO1FO00160 1098 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 NVLO15381 856 aaKnown RBP16.97■□□□□ 0.31
SCAF1-204ENST00000601038 SERPING1P05155 500 aa16.97■□□□□ 0.31
SCAF1-204ENST00000601038 HGFP14210 728 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms