RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PRR23AA6NEV1 266 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 MROH6A6NGR9 719 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 MMP20O60882 483 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 TUBBP07437 444 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 TDGF1P13385 188 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 OXTRP30559 389 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 HMGCLP35914 325 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 PTPRCAPQ14761 206 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 FAM160A2Q8N612 972 aaPredicted RBP20.46■□□□□ 0.87
PNKP-215ENST00000600910 FBXO36Q8NEA4 188 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 PTCD2Q8WV60 388 aaKnown RBP20.46■□□□□ 0.87
PNKP-215ENST00000600910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.46■□□□□ 0.87
PNKP-215ENST00000600910 TOE1Q96GM8 510 aaKnown RBP20.46■□□□□ 0.87
PNKP-215ENST00000600910 EBNA1BP2Q99848 306 aaKnown RBP20.46■□□□□ 0.87
PNKP-215ENST00000600910 KIFC1Q9BW19 673 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 KDM4CQ9H3R0 1056 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 PREBQ9HCU5 417 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 NUMA1Q14980 2115 aa20.46■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3DA0A087WVF3 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3IA0A087WXS9 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3EA0A087X179 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3KA0A087X1G2 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 IGHV1OR15-9A0A0B4J2B8 117 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 MAGEB16A2A368 324 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3FA6NER0 549 aaPredicted RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3LB9A6J9 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 C1SP09871 688 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3HP0C7X1 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 LPOP22079 712 aaPredicted RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 CD6P30203 668 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 ZNF140P52738 457 aaPredicted RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 STC1P52823 247 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 PDE1BQ01064 536 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 CSTF1Q05048 431 aaKnown RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 LAMB3Q13751 1172 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 MAP7D1Q3KQU3 841 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3GQ6DHY5 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3CQ6IPX1 549 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 CEP128Q6ZU80 1094 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 HSD11B1LQ7Z5J1 315 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 TBC1D3Q8IZP1 549 aaPredicted RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 MRM3Q9HC36 420 aaKnown RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 BPIFA1Q9NP55 256 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 WSB2Q9NYS7 404 aaPredicted RBP20.45■□□□□ 0.87
PNKP-215ENST00000600910 IL17CQ9P0M4 197 aa20.45■□□□□ 0.87
PNKP-215ENST00000600910 GOLGA8CPA6NN73 597 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 SLC34A2O95436 690 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 SEMA4FO95754 770 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 C6P13671 934 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 MAGEA4P43358 317 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 TSTD2Q5T7W7 516 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 ARMC3Q5W041 872 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 CES3Q6UWW8 571 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 CBARPQ8N350 705 aaPredicted RBP20.45■□□□□ 0.86
PNKP-215ENST00000600910 OR4K2Q8NGD2 314 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 OR13C4Q8NGS5 318 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 OR2T34Q8NGX1 318 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 PYROXD1Q8WU10 500 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 STYXQ8WUJ0 223 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 MFSD3Q96ES6 412 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 SLC2A6Q9UGQ3 507 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 ZC3H7BQ9UGR2 993 aaKnown RBP20.45■□□□□ 0.86
PNKP-215ENST00000600910 ZFR2Q9UPR6 939 aaKnown RBP20.45■□□□□ 0.86
PNKP-215ENST00000600910 INVSQ9Y283 1065 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 COQ6Q9Y2Z9 468 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 PKP3Q9Y446 797 aa20.45■□□□□ 0.86
PNKP-215ENST00000600910 BPTFQ12830 3046 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 CCDC163A0A0D9SF12 145 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 FAM237BA0A1B0GVD1 139 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 LRRC72A6NJI9 287 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 PSMD11O00231 422 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 STX7O15400 261 aaKnown RBP20.44■□□□□ 0.86
PNKP-215ENST00000600910 RNGTTO60942 597 aaKnown RBP20.44■□□□□ 0.86
PNKP-215ENST00000600910 PGAM1P18669 254 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 NMBRP28336 390 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 FNTBP49356 437 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 ACOX1Q15067 660 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 USP39Q53GS9 565 aaKnown RBP20.44■□□□□ 0.86
PNKP-215ENST00000600910 SEL1L3Q68CR1 1132 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 NLRP9Q7RTR0 991 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 DNAJC1Q96KC8 554 aaKnown RBP20.44■□□□□ 0.86
PNKP-215ENST00000600910 C9orf72Q96LT7 481 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 NAT9Q9BTE0 207 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 FBXO4Q9UKT5 387 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 RPS6KL1Q9Y6S9 549 aa20.44■□□□□ 0.86
PNKP-215ENST00000600910 A0A1W2PQU0 124 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 IGLON5A6NGN9 336 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 PRR33A8MZF0 331 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 GPR37L1O60883 481 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 GM2AP17900 193 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 ETV3P41162 512 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 PPP2CBP62714 309 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 RPS21P63220 83 aaKnown RBP20.43■□□□□ 0.86
PNKP-215ENST00000600910 PPP2CAP67775 309 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 TMPRSS15P98073 1019 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 KIAA1161Q6NSJ0 714 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 ESRP1Q6NXG1 681 aaKnown RBP20.43■□□□□ 0.86
PNKP-215ENST00000600910 NEK5Q6P3R8 708 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 RFLNAQ6ZTI6 216 aa20.43■□□□□ 0.86
PNKP-215ENST00000600910 TMEM135Q86UB9 458 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms