RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IFNEQ86WN2 208 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 FBXW8Q8N3Y1 598 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 CEP70Q8NHQ1 597 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 ARRDC2Q8TBH0 407 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 TSPAN17Q96FV3 270 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 PCDHAC1Q9H158 963 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 PIF1Q9H611 641 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 S100A14Q9HCY8 104 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 IGSF5Q9NSI5 407 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 VPS28Q9UK41 221 aa11.55□□□□□ -0.56
ARHGEF1-220ENST00000600274 A0A087X1B8 175 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 OR6C75A6NL08 312 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 UBDO15205 165 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 RPLP2P05387 115 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 BMP1P13497 986 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 CLCN5P51795 746 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 SULT2A1Q06520 285 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 GPR17Q13304 367 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 MAP7D1Q3KQU3 841 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 TPGS1Q6ZTW0 290 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PIWIL4Q7Z3Z4 852 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 AFAP1L2Q8N4X5 818 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PHC3Q8NDX5 983 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 BHLHE22Q8NFJ8 381 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 GPR78Q96P69 363 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEMA6AQ9H2E6 1030 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 DDX18Q9NVP1 670 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF212Q9UDV6 495 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 ADAMTS6Q9UKP5 1117 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 MAGEA13PA6NCF6 341 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 COCHO43405 550 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 OR1I1O60431 355 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 ACSL4O60488 711 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 TPST1O60507 370 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 GJA1P17302 382 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 HOXC13P31276 330 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 FASTKQ14296 549 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PTPRNQ16849 979 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 IYDQ6PHW0 289 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 KDM1BQ8NB78 822 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 OR4L1Q8NH43 312 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 B4GALNT2Q8NHY0 566 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PTERQ96BW5 349 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 CASD1Q96PB1 797 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 EBF3Q9H4W6 596 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 STN1Q9H668 368 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 VPS45Q9NRW7 570 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 RNF112Q9ULX5 631 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PCDHB9Q9Y5E1 797 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 E5RI56 91 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 BTN3A1O00481 513 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 NR5A2O00482 541 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 KIF3CO14782 793 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 LDB2O43679 373 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 S1PR4O95977 384 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 LINC00032P0C843 101 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 IL10RBQ08334 325 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PTK2BQ14289 1009 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 DBN1Q16643 649 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 TECRLQ5HYJ1 363 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 IRGCQ6NXR0 463 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 PAQR3Q6TCH7 311 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 DHDDSQ86SQ9 333 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 SNRNP27Q8WVK2 155 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 MRPL1Q9BYD6 325 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 OLA1Q9NTK5 396 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 GMPR2Q9P2T1 348 aaKnown RBP11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 FKBPLQ9UIM3 349 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 V9GYQ6 96 aa11.54□□□□□ -0.56
ARHGEF1-220ENST00000600274 GOLGA4Q13439 2230 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 DNAJA2O60884 412 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 C1RP00736 705 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 MYL4P12829 197 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ALDH1A3P47895 512 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 AQP4P55087 323 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 CDC16Q13042 620 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 BFSP2Q13515 415 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 EIF4EBP2Q13542 120 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TSNQ15631 228 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 PAOXQ6QHF9 649 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ISL2Q96A47 359 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRAF6Q9Y4K3 522 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 MOXD2PA6NHM9 499 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 SDHDO14521 159 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 STX7O15400 261 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms