RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 RDH14Q9HBH5 336 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 PHPT1Q9NRX4 125 aaPredicted RBP17.21■□□□□ 0.35
SMG9-210ENST00000600097 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 GPATCH2LQ9NWQ4 482 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 TRNAU1APQ9NX07 287 aaKnown RBP17.21■□□□□ 0.35
SMG9-210ENST00000600097 SEPT3Q9UH03 358 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 LGALS16A8MUM7 142 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 STMND1H3BQB6 276 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 DFFAO00273 331 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 TERTO14746 1132 aaKnown RBP17.2■□□□□ 0.34
SMG9-210ENST00000600097 B4GAT1O43505 415 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 ERCC2P18074 760 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 PSMA2P25787 234 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 ALDH4A1P30038 563 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 ZNF135P52742 658 aaPredicted RBP17.2■□□□□ 0.34
SMG9-210ENST00000600097 COPB1P53618 953 aaKnown RBP17.2■□□□□ 0.34
SMG9-210ENST00000600097 NR1D2Q14995 579 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 TBR1Q16650 682 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 AMZ1Q400G9 498 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 ARHGAP12Q8IWW6 846 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 ZDHHC1Q8WTX9 485 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 NUS1Q96E22 293 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 SPATS2LQ9NUQ6 558 aaKnown RBP17.2■□□□□ 0.34
SMG9-210ENST00000600097 PARVAQ9NVD7 372 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 B4GALT6Q9UBX8 382 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 BOD1L1Q8NFC6 3051 aa17.2■□□□□ 0.34
SMG9-210ENST00000600097 HECTD1Q9ULT8 2610 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 A8MX80 341 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 SUV39H1O43463 412 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 SOCS5O75159 536 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 PPFIA2O75334 1257 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 FGF1P05230 155 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 FERP16591 822 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 GPR3P46089 330 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 ATP1A2P50993 1020 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 MAZP56270 477 aaKnown RBP17.19■□□□□ 0.34
SMG9-210ENST00000600097 OR1D5P58170 312 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 BIRC2Q13490 618 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 TRA2AQ13595 282 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMG9-210ENST00000600097 CA9Q16790 459 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 TMCO4Q5TGY1 634 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 HEATR4Q86WZ0 1026 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 NRROSQ86YC3 692 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 PSTKQ8IV42 348 aaKnown RBP17.19■□□□□ 0.34
SMG9-210ENST00000600097 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 LZTR1Q8N653 840 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 ZNF599Q96NL3 588 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 ERGIC2Q96RQ1 377 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 SNRNP25Q9BV90 132 aaKnown RBP17.19■□□□□ 0.34
SMG9-210ENST00000600097 TEX101Q9BY14 249 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 TAAR2Q9P1P5 351 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 LIMA1Q9UHB6 759 aaKnown RBP17.19■□□□□ 0.34
SMG9-210ENST00000600097 PCDHGA3Q9Y5H0 932 aa17.19■□□□□ 0.34
SMG9-210ENST00000600097 TLN1Q9Y490 2541 aaKnown RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 HTRA2O43464 458 aaPredicted RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 PRPSAP2O60256 369 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 RNF8O76064 485 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 CEACAM5P06731 702 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 CCL4P13236 92 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 WT1P19544 449 aaPredicted RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 VIPR1P32241 457 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 HSPA9P38646 679 aaKnown RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 HCAR3P49019 387 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 UBXN1Q04323 297 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 LBRQ14739 615 aaKnown RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 CNGA3Q16281 694 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 PPP6R3Q5H9R7 873 aaPredicted RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 PLEKHA7Q6IQ23 1121 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 NPWQ8N729 165 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 CCDC112Q8NEF3 446 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 TAAR9Q96RI9 348 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 KCTD15Q96SI1 283 aaPredicted RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 NUDT22Q9BRQ3 303 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 FRMD8Q9BZ67 464 aaPredicted RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 SLC25A18Q9H1K4 315 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 GEMIN8Q9NWZ8 242 aaKnown RBP17.18■□□□□ 0.34
SMG9-210ENST00000600097 PCSK1NQ9UHG2 260 aa17.18■□□□□ 0.34
SMG9-210ENST00000600097 ANKRD36A6QL64 1941 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 IGHV5-10-1A0A0J9YXX1 117 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 LRRC10BA6NIK2 292 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 PSMD11O00231 422 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
SMG9-210ENST00000600097 ECEL1O95672 775 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 CYP2A6P11509 494 aaPredicted RBP17.17■□□□□ 0.34
SMG9-210ENST00000600097 TEAD1P28347 426 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 CD1CP29017 333 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 CYP4F2P78329 520 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 SLC10A7Q0GE19 358 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 ZNF235Q14590 738 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 ZNF574Q6ZN55 896 aaPredicted RBP17.17■□□□□ 0.34
SMG9-210ENST00000600097 ARHGAP36Q6ZRI8 547 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 RCBTB1Q8NDN9 531 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 OR4D9Q8NGE8 314 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 FNIP1Q8TF40 1166 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 DTD2Q96FN9 168 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 DPYSL5Q9BPU6 564 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms