RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 EIF2B5Q13144 721 aaKnown RBP15.22■□□□□ 0.03
LIG1-219ENST00000600055 SUZ12Q15022 739 aaKnown RBP15.22■□□□□ 0.03
LIG1-219ENST00000600055 SLC14A2Q15849 920 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 CDKN3Q16667 212 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ANKRD20A2Q5SQ80 823 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ANKRD20A1Q5TYW2 823 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ANKRD20A3Q5VUR7 823 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 TECPR1Q7Z6L1 1165 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 OXR1Q8N573 874 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 TTC13Q8NBP0 860 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 DTD2Q96FN9 168 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 GORASP1Q9BQQ3 440 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 APOOQ9BUR5 198 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ADGRE3Q9BY15 652 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 SLC32A1Q9H598 525 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 DNAJC28Q9NX36 388 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 CD84Q9UIB8 345 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 KLF15Q9UIH9 416 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 TRHDEQ9UKU6 1024 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 PCOLCE2Q9UKZ9 415 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 DNPEPQ9ULA0 475 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ASCC3Q8N3C0 2202 aaKnown RBP15.21■□□□□ 0.03
LIG1-219ENST00000600055 LRRK1Q38SD2 2015 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 SPAARA0A1B0GVQ0 90 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 PSMD11O00231 422 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 FLRT2O43155 660 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 CBFA2T3O75081 653 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 CEACAM1P13688 526 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 STC1P52823 247 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 THOP1P52888 689 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 YPEL5P62699 121 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 MTM1Q13496 603 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 PNCKQ6P2M8 343 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 KANSL1Q7Z3B3 1105 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 FAM71DQ8N9W8 422 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 RHBDD1Q8TEB9 315 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 MRGPRX2Q96LB1 330 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 LYSMD1Q96S90 227 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 GBA3Q9H227 469 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 CARD9Q9H257 536 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 TCEAL2Q9H3H9 227 aaPredicted RBP15.21■□□□□ 0.03
LIG1-219ENST00000600055 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
LIG1-219ENST00000600055 C1orf232A0A0U1RR37 186 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 MED19A0JLT2 244 aaPredicted RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 USP27XA6NNY8 438 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ENC1O14682 589 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 YKT6O15498 198 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 NDST3O95803 873 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 CSF2P04141 144 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ZNF30P17039 623 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 PSMB4P28070 264 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 CXCR5P32302 372 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 CHRNA4P43681 627 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 GDF10P55107 478 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ZNF569Q5MCW4 686 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 N4BP2L1Q5TBK1 243 aaPredicted RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 KCTD16Q68DU8 428 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ESRP1Q6NXG1 681 aaKnown RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 MACC1Q6ZN28 852 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 LYSMD3Q7Z3D4 306 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 PARGQ86W56 976 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SLC25A45Q8N413 288 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SLC25A41Q8N5S1 370 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 EID2Q8N6I1 236 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 IPMKQ8NFU5 416 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 BAHD1Q8TBE0 780 aaPredicted RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 C1orf54Q8WWF1 131 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 FUBP1Q96AE4 644 aaKnown RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 EID2BQ96D98 161 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SPATA13Q96N96 652 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 FERMT1Q9BQL6 677 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 TMEM121Q9BTD3 319 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 LGR4Q9BXB1 951 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 ABCG8Q9H221 673 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 PYCARDQ9ULZ3 195 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SHOC2Q9UQ13 582 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 SPO11Q9Y5K1 396 aa15.2■□□□□ 0.02
LIG1-219ENST00000600055 TP53BP1Q12888 1972 aaPredicted RBP15.2■□□□□ 0.02
LIG1-219ENST00000600055 KNL1Q8NG31 2342 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 GOLGA6CA6NDK9 693 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 GOLGA6BA6NDN3 693 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 C5orf60A6NFR6 353 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 TOR1BO14657 336 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 LIASO43766 372 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 PIAS2O75928 621 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 STK10O94804 968 aaKnown RBP15.19■□□□□ 0.02
LIG1-219ENST00000600055 AGTP01019 485 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 SLC4A1P02730 911 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 ATXN1LP0C7T5 689 aaKnown RBP15.19■□□□□ 0.02
LIG1-219ENST00000600055 GOLGA6DP0CG33 693 aa15.19■□□□□ 0.02
LIG1-219ENST00000600055 NME1P15531 152 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms