RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 RANBP9Q96S59 729 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 WRAP53Q9BUR4 548 aaKnown RBP15.94■□□□□ 0.14
LTBP4-222ENST00000598256 BTBD1Q9H0C5 482 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 TSPYL1Q9H0U9 437 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 ZFYVE1Q9HBF4 777 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 EBF1Q9UH73 591 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 CHMP2BQ9UQN3 213 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 TCAF1Q9Y4C2 921 aa15.94■□□□□ 0.14
LTBP4-222ENST00000598256 A0A0U1RQS6 177 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 CCDC78A2IDD5 438 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 FAM47DPA6NHR8 397 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 C2orf81A6NN90 581 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 E7ESA3 106 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 SPINT1O43278 529 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 TSPAN6O43657 245 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 CLDN7O95471 211 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 IGLV3-19P01714 112 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 MYBL2P10244 700 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 LPOP22079 712 aaPredicted RBP15.93■□□□□ 0.14
LTBP4-222ENST00000598256 ADRA1DP25100 572 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 ELK3P41970 407 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 TAS2R38P59533 333 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 PDE1BQ01064 536 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 MSLNQ13421 630 aaPredicted RBP15.93■□□□□ 0.14
LTBP4-222ENST00000598256 CNGA3Q16281 694 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 TMEM52BQ4KMG9 183 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 MSS51Q4VC12 460 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 TSSK4Q6SA08 328 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 PTCD2Q8WV60 388 aaKnown RBP15.93■□□□□ 0.14
LTBP4-222ENST00000598256 RLN3Q8WXF3 142 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.93■□□□□ 0.14
LTBP4-222ENST00000598256 LRRC39Q96DD0 335 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 SGK2Q9HBY8 427 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 PREBQ9HCU5 417 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 SOX13Q9UN79 622 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 ARL5AQ9Y689 179 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 PLXNB3Q9ULL4 1909 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 DMXL1Q9Y485 3027 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 THADAQ6YHU6 1953 aa15.93■□□□□ 0.14
LTBP4-222ENST00000598256 CACNA1IQ9P0X4 2223 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3DA0A087WVF3 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3IA0A087WXS9 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3EA0A087X179 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3KA0A087X1G2 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3FA6NER0 549 aaPredicted RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 LRRC72A6NJI9 287 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3LB9A6J9 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 PSMD11O00231 422 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 AURKAO14965 403 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 CTIFO43310 598 aaKnown RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 GALR2O43603 387 aaPredicted RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 BUD23O43709 281 aaKnown RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 C1SP09871 688 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3HP0C7X1 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 CD6P30203 668 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 OXTRP30559 389 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 ACSL1P33121 698 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 NUBP1P53384 320 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 FASTKD3Q14CZ7 662 aaKnown RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 ACOX1Q15067 660 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3GQ6DHY5 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3CQ6IPX1 549 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 LIPIQ6XZB0 460 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 CCNI2Q6ZMN8 369 aaPredicted RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 NLRP9Q7RTR0 991 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 ANKMY2Q8IV38 441 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TBC1D3Q8IZP1 549 aaPredicted RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 AGGF1Q8N302 714 aaeCLIP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TTC30BQ8N4P2 665 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 FBXO36Q8NEA4 188 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 CFAP36Q96G28 342 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 SIGLEC10Q96LC7 697 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 KDM4CQ9H3R0 1056 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 MRM3Q9HC36 420 aaKnown RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 PKD2L2Q9NZM6 624 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
LTBP4-222ENST00000598256 TP53BP1Q12888 1972 aaPredicted RBP15.92■□□□□ 0.14
LTBP4-222ENST00000598256 IGHV1OR15-9A0A0B4J2B8 117 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 STX7O15400 261 aaKnown RBP15.91■□□□□ 0.14
LTBP4-222ENST00000598256 LDB2O43679 373 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 LZTS3O60299 673 aaPredicted RBP15.91■□□□□ 0.14
LTBP4-222ENST00000598256 MMP20O60882 483 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 RNGTTO60942 597 aaKnown RBP15.91■□□□□ 0.14
LTBP4-222ENST00000598256 SEMA4FO95754 770 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 C6P13671 934 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 PGAM1P18669 254 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 HOXA6P31267 233 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 HMGCLP35914 325 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 NBL1P41271 181 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 LIG3P49916 1009 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 STC1P52823 247 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 CSTF1Q05048 431 aaKnown RBP15.91■□□□□ 0.14
LTBP4-222ENST00000598256 CDKN3Q16667 212 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 USP39Q53GS9 565 aaKnown RBP15.91■□□□□ 0.14
LTBP4-222ENST00000598256 TSTD2Q5T7W7 516 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 ARMC3Q5W041 872 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 KIAA1161Q6NSJ0 714 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 TMC3Q7Z5M5 1100 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 CCNJLQ8IV13 435 aa15.91■□□□□ 0.14
LTBP4-222ENST00000598256 OR13C4Q8NGS5 318 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms