RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ETV3P41162 512 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 RABIFP47224 123 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 CCT8P50990 548 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 THOP1P52888 689 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 BNIP3Q12983 259 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 KLF1Q13351 362 aaPredicted RBP11.1□□□□□ -0.63
LIG1-211ENST00000596457 PRPSAP1Q14558 356 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 INPP5AQ14642 412 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 QPCTQ16769 361 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 LONRF2Q1L5Z9 754 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ZNF423Q2M1K9 1284 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 WSCD2Q2TBF2 565 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 LRRC66Q68CR7 880 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ITPRIPL1Q6GPH6 555 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
LIG1-211ENST00000596457 ARHGEF18Q6ZSZ5 1173 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ABI3BPQ7Z7G0 1075 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 IQCHQ86VS3 1027 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 GATAD2AQ86YP4 633 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 FAM71DQ8N9W8 422 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 DENND6BQ8NEG7 585 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 DEFB124Q8NES8 71 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 IPMKQ8NFU5 416 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 UBE2Q2Q8WVN8 375 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 NUS1Q96E22 293 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 CAMK1GQ96NX5 476 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 FCRL5Q96RD9 977 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ELF4Q99607 663 aaPredicted RBP11.1□□□□□ -0.63
LIG1-211ENST00000596457 TMEM121Q9BTD3 319 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 CARD9Q9H257 536 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 SLC32A1Q9H598 525 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 CAAP1Q9H8G2 361 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
LIG1-211ENST00000596457 DNAJC28Q9NX36 388 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ZNF148Q9UQR1 794 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 PPIL1Q9Y3C6 166 aa11.1□□□□□ -0.63
LIG1-211ENST00000596457 ASPMQ8IZT6 3477 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 A0A1B0GTQ1 180 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 CAPN8A6NHC0 703 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 SH3BP5O60239 455 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 DFNA5O60443 496 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 FGGP02679 453 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
LIG1-211ENST00000596457 C1SP09871 688 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 CD59P13987 128 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 GM2AP17900 193 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 MSNP26038 577 aaKnown RBP11.09□□□□□ -0.63
LIG1-211ENST00000596457 ARRB1P49407 418 aaPredicted RBP11.09□□□□□ -0.63
LIG1-211ENST00000596457 GEMP55040 296 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 WNT3AP56704 352 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 OVGP1Q12889 678 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 SUZ12Q15022 739 aaKnown RBP11.09□□□□□ -0.63
LIG1-211ENST00000596457 TPRG1LQ5T0D9 272 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 RFLNAQ6ZTI6 216 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 Q6ZVL8 140 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 RD3Q7Z3Z2 195 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 SLC22A18ASQ8N1D0 253 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 FAM174AQ8TBP5 190 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
LIG1-211ENST00000596457 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 APOOQ9BUR5 198 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 GBA3Q9H227 469 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 USP29Q9HBJ7 922 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 SHOC2Q9UQ13 582 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 OR1A2Q9Y585 309 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
LIG1-211ENST00000596457 FRYQ5TBA9 3013 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 ZZEF1O43149 2961 aa11.09□□□□□ -0.63
LIG1-211ENST00000596457 GIPC1O14908 333 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SCAMP1O15126 338 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 LIASO43766 372 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 NDST3O95803 873 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 AGTP01019 485 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 IFNB1P01574 187 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 ZNF30P17039 623 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 CHRNA4P43681 627 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 GDF10P55107 478 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 PFN3P60673 137 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 RPL26P61254 145 aaKnown RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 SHC2P98077 582 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 PTSQ03393 145 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SLC14A1Q13336 389 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 MPP3Q13368 585 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 OLIG2Q13516 323 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 PTK2BQ14289 1009 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 FZD2Q14332 565 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SPARCL1Q14515 664 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 SHBQ15464 509 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 TCEA2Q15560 299 aa11.08□□□□□ -0.64
LIG1-211ENST00000596457 N4BP2L1Q5TBK1 243 aaPredicted RBP11.08□□□□□ -0.64
LIG1-211ENST00000596457 FAXCQ5TGI0 409 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms