RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 VPS16Q9H269 839 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 CLSTN2Q9H4D0 955 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 CARS2Q9HA77 564 aaKnown RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 GPATCH2LQ9NWQ4 482 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TRNAU1APQ9NX07 287 aaKnown RBP9.98□□□□□ -0.81
LIG1-209ENST00000596104 DONSONQ9NYP3 566 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 TAAR2Q9P1P5 351 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 B4GALT6Q9UBX8 382 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 MOSPD1Q9UJG1 213 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 SIK3Q9Y2K2 1263 aa9.98□□□□□ -0.81
LIG1-209ENST00000596104 ARHGAP42A6NI28 874 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 A8MX80 341 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 TEX33O43247 280 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 ECEL1O95672 775 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 LIFP15018 202 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 CSF2RBP32927 897 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 UGT1A3P35503 534 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 GPR3P46089 330 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 ATP1A2P50993 1020 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 AP1S1P61966 158 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 POLR2LP62875 67 aaKnown RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 NSUN2Q08J23 767 aaKnown RBP eCLIP9.97□□□□□ -0.81
LIG1-209ENST00000596104 ILF3Q12906 894 aaKnown RBP eCLIP9.97□□□□□ -0.81
LIG1-209ENST00000596104 SQSTM1Q13501 440 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 TRA2AQ13595 282 aaKnown RBP eCLIP9.97□□□□□ -0.812e-6■□□□□ 8.8
LIG1-209ENST00000596104 RFTN1Q14699 578 aaPredicted RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 ACOX1Q15067 660 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 CNGA3Q16281 694 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 BORAQ6PGQ7 559 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 ARHGAP36Q6ZRI8 547 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 HEATR4Q86WZ0 1026 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 PTRH1Q86Y79 214 aaKnown RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 NAGSQ8N159 534 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 CBARPQ8N350 705 aaPredicted RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 NPWQ8N729 165 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 OR4D9Q8NGE8 314 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 ART4Q93070 314 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 NUS1Q96E22 293 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 PSKH2Q96QS6 385 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 CINPQ9BW66 212 aaPredicted RBP9.97□□□□□ -0.81
LIG1-209ENST00000596104 GSDMCQ9BYG8 508 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 EPN3Q9H201 632 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 ANKMY1Q9P2S6 941 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 TUBD1Q9UJT1 453 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 AP4E1Q9UPM8 1137 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 B3GALT1Q9Y5Z6 326 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 UNC13CQ8NB66 2214 aa9.97□□□□□ -0.81
LIG1-209ENST00000596104 FLNCQ14315 2725 aa9.96□□□□□ -0.81
LIG1-209ENST00000596104 IGHV1OR21-1A0A087WYE8 117 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CLEC18AA5D8T8 446 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 ANKRD62A6NC57 917 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 PPM1DO15297 605 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 HTRA2O43464 458 aaPredicted RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 HEXIM1O94992 359 aaKnown RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 THRAP10827 490 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 ERCC2P18074 760 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 LHCGRP22888 699 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 TEAD1P28347 426 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 GNPDA1P46926 289 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SCNN1BP51168 640 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 POLE2P56282 527 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CDK3Q00526 305 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CTBSQ01459 385 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 IL10RBQ08334 325 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 KCNAB2Q13303 367 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 KRT31Q15323 416 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CDKAL1Q5VV42 579 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 NKAIN2Q5VXU1 208 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SLC30A9Q6PML9 568 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CLEC18BQ6UXF7 455 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 TP53INP2Q8IXH6 220 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 IL22RA1Q8N6P7 574 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 BMPERQ8N8U9 685 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 CLEC18CQ8NCF0 446 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 AGBL5Q8NDL9 886 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 DTD2Q96FN9 168 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SCARF2Q96GP6 870 aaPredicted RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 PEBP4Q96S96 227 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SPRY4Q9C004 299 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 DHX35Q9H5Z1 703 aaKnown RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 SUDS3Q9H7L9 328 aaPredicted RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 SP110Q9HB58 689 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 PHPT1Q9NRX4 125 aaPredicted RBP9.96□□□□□ -0.82
LIG1-209ENST00000596104 TMEM9Q9P0T7 183 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 PDP2Q9P2J9 529 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SUFUQ9UMX1 484 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 SLC17A4Q9Y2C5 497 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 BSNQ9UPA5 3926 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 COL12A1Q99715 3063 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 LRRK2Q5S007 2527 aa9.96□□□□□ -0.82
LIG1-209ENST00000596104 B4E171 279 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 EIF3CLB5ME19 914 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 DFFAO00273 331 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 EEF2KO00418 725 aaKnown RBP9.95□□□□□ -0.82
LIG1-209ENST00000596104 ZW10O43264 779 aa9.95□□□□□ -0.82
LIG1-209ENST00000596104 RAD1O60671 282 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms