RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CR2P20023 1033 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 TYRO3Q06418 890 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 DPYSL2Q16555 572 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 E4F1Q66K89 784 aaPredicted RBP23.95■■□□□ 1.42
LSM4-202ENST00000593564 KIAA1524Q8TCG1 905 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 TRIM11Q96F44 468 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 MED8Q96G25 268 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 NAT10Q9H0A0 1025 aaKnown RBP23.95■■□□□ 1.42
LSM4-202ENST00000593564 KCTD5Q9NXV2 234 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 MOSPD1Q9UJG1 213 aa23.95■■□□□ 1.42
LSM4-202ENST00000593564 TENM4Q6N022 2769 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 TTC24A2A3L6 582 aaPredicted RBP23.94■■□□□ 1.42
LSM4-202ENST00000593564 GOLGA6L22H0YM25 854 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 J3QKU1 62 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 MYBL1P10243 752 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 VIPR1P32241 457 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 ARHGEF7Q14155 803 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 CNGA3Q16281 694 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 GPBAR1Q8TDU6 330 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 NUDCD1Q96RS6 583 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 CARS2Q9HA77 564 aaKnown RBP23.94■■□□□ 1.42
LSM4-202ENST00000593564 MRPL47Q9HD33 250 aaKnown RBP23.94■■□□□ 1.42
LSM4-202ENST00000593564 PHPT1Q9NRX4 125 aaPredicted RBP23.94■■□□□ 1.42
LSM4-202ENST00000593564 PCDHGC4Q9Y5F7 938 aa23.94■■□□□ 1.42
LSM4-202ENST00000593564 HEXIM1O94992 359 aaKnown RBP23.93■■□□□ 1.42
LSM4-202ENST00000593564 CPP00450 1065 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 CCNB1P14635 433 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 NFKBIAP25963 317 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 IL1R2P27930 398 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 ANP32AP39687 249 aaKnown RBP23.93■■□□□ 1.42
LSM4-202ENST00000593564 ARL4AP40617 200 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 BOLA3Q53S33 107 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 TMCO3Q6UWJ1 677 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 HEATR4Q86WZ0 1026 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 SLITRK4Q8IW52 837 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 CBARPQ8N350 705 aaPredicted RBP23.93■■□□□ 1.42
LSM4-202ENST00000593564 PGBD5Q8N414 524 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 PDCD6IPQ8WUM4 868 aaKnown RBP23.93■■□□□ 1.42
LSM4-202ENST00000593564 MGME1Q9BQP7 344 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 BPIFA3Q9BQP9 254 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 TEX101Q9BY14 249 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 NOD2Q9HC29 1040 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 ETNK2Q9NVF9 386 aa23.93■■□□□ 1.42
LSM4-202ENST00000593564 A0A1W2PQC6 194 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 B8ZZF3 427 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 MBD3O95983 291 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 LIPCP11150 499 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 B4GALNT1Q00973 533 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 KLHL30Q0D2K2 578 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 SMTNL2Q2TAL5 461 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 FILIP1LQ4L180 1135 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 TMPRSS9Q7Z410 1059 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 ZNF438Q7Z4V0 828 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 POLNQ7Z5Q5 900 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 C17orf82Q86X59 251 aaPredicted RBP23.92■■□□□ 1.42
LSM4-202ENST00000593564 BBS5Q8N3I7 341 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 DTD2Q96FN9 168 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 CMKLR1Q99788 373 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 GSDMCQ9BYG8 508 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 SPATS2LQ9NUQ6 558 aaKnown RBP23.92■■□□□ 1.42
LSM4-202ENST00000593564 TRNAU1APQ9NX07 287 aaKnown RBP23.92■■□□□ 1.42
LSM4-202ENST00000593564 MYO1AQ9UBC5 1043 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 PHTF1Q9UMS5 762 aa23.92■■□□□ 1.42
LSM4-202ENST00000593564 SCN8AQ9UQD0 1980 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 MAFKO60675 156 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 CEACAM5P06731 702 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 CYP2A6P11509 494 aaPredicted RBP23.91■■□□□ 1.42
LSM4-202ENST00000593564 ITIH1P19827 911 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 LHCGRP22888 699 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 AMPD1P23109 780 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 ILF3Q12906 894 aaKnown RBP eCLIP23.91■■□□□ 1.42
LSM4-202ENST00000593564 TRAF2Q12933 501 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 TGIF1Q15583 401 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 ANO6Q4KMQ2 910 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 RALGPS1Q5JS13 557 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 NRROSQ86YC3 692 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 CSPG4P5Q96PW8 444 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 FRMD8Q9BZ67 464 aaPredicted RBP23.91■■□□□ 1.42
LSM4-202ENST00000593564 ISCUQ9H1K1 167 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.91■■□□□ 1.42
LSM4-202ENST00000593564 WDR70Q9NW82 654 aa23.91■■□□□ 1.42
LSM4-202ENST00000593564 ARHGEF17Q96PE2 2063 aaPredicted RBP23.91■■□□□ 1.42
LSM4-202ENST00000593564 PSMD11O00231 422 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 FUCA1P04066 466 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 TCF4P15884 667 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 TEAD1P28347 426 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 ETV3P41162 512 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 MAZP56270 477 aaKnown RBP23.9■■□□□ 1.42
LSM4-202ENST00000593564 CDK3Q00526 305 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 MAP9Q49MG5 647 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 HSD11B1LQ7Z5J1 315 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 ATPAF2Q8N5M1 289 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 ZDHHC1Q8WTX9 485 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 HSPH1Q92598 858 aa23.9■■□□□ 1.42
LSM4-202ENST00000593564 MCCC1Q96RQ3 725 aaPredicted RBP23.9■■□□□ 1.42
LSM4-202ENST00000593564 PRAMEF33A0A0G2JMD5 474 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 NPIPB15A6NHN6 443 aaPredicted RBP23.89■■□□□ 1.41
LSM4-202ENST00000593564 SMTNL1A8MU46 457 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 B4GAT1O43505 415 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 PRAMEF10O60809 474 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms