RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SCN8AQ9UQD0 1980 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 A0A1B0GTH6 734 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 K7ENP7 123 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 HTRA2O43464 458 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 MAFKO60675 156 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 SOCS5O75159 536 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 PEX11BO96011 259 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 MYCLP1P12525 358 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 PLA2G2AP14555 144 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 CR2P20023 1033 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 CCKBRP32239 447 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 HSPA9P38646 679 aaKnown RBP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 MAXP61244 160 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 ARHGEF7Q14155 803 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 LY6DQ14210 128 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 HLTFQ14527 1009 aaKnown RBP eCLIP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 BOLA3Q53S33 107 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 INO80CQ6PI98 192 aaPredicted RBP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 SPRED1Q7Z699 444 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 TTC9Q92623 222 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 WBP1Q96G27 269 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 CSPG4P5Q96PW8 444 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 ISCUQ9H1K1 167 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 CARS2Q9HA77 564 aaKnown RBP20.49■□□□□ 0.87
TRIM47-207ENST00000593089 NOD2Q9HC29 1040 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 PISDQ9UG56 409 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 KALRNO60229 2985 aa20.49■□□□□ 0.87
TRIM47-207ENST00000593089 A0A1W2PQ67 120 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 PDE2AO00408 941 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-207ENST00000593089 HEXIM1O94992 359 aaKnown RBP20.48■□□□□ 0.87
TRIM47-207ENST00000593089 JMJD7P0C870 316 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 RARAP10276 462 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 ZNF165P49910 485 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 TRAF2Q12933 501 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 TSR1Q2NL82 804 aaKnown RBP20.48■□□□□ 0.87
TRIM47-207ENST00000593089 TDRD12Q587J7 1177 aaKnown RBP20.48■□□□□ 0.87
TRIM47-207ENST00000593089 TXNRD3NBQ6F5E7 133 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 HEATR4Q86WZ0 1026 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 BBS5Q8N3I7 341 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 ATPAF2Q8N5M1 289 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 NSMCE1Q8WV22 266 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 SPOCK2Q92563 424 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 SEMA4CQ9C0C4 833 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 PHPT1Q9NRX4 125 aaPredicted RBP20.48■□□□□ 0.87
TRIM47-207ENST00000593089 PHTF1Q9UMS5 762 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 LOXL2Q9Y4K0 774 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 PCDHGA7Q9Y5G6 932 aa20.48■□□□□ 0.87
TRIM47-207ENST00000593089 ARHGEF17Q96PE2 2063 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-207ENST00000593089 GOLGA6CA6NDK9 693 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 GOLGA6BA6NDN3 693 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 SERPINC1P01008 464 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 GOLGA6DP0CG33 693 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 CYP2A6P11509 494 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-207ENST00000593089 PNLIPP16233 465 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 ITIH1P19827 911 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 LHCGRP22888 699 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 NFKBIAP25963 317 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 ETV3P41162 512 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 PTPRRQ15256 657 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 HSD11B1LQ7Z5J1 315 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 DTD2Q96FN9 168 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 BTBD6Q96KE9 485 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 CCNL2Q96S94 520 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-207ENST00000593089 MGME1Q9BQP7 344 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 TEX101Q9BY14 249 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 SPATS2LQ9NUQ6 558 aaKnown RBP20.47■□□□□ 0.87
TRIM47-207ENST00000593089 GOLGA6AQ9NYA3 693 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 ATMQ13315 3056 aa20.47■□□□□ 0.87
TRIM47-207ENST00000593089 CAPN8A6NHC0 703 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 NPIPB15A6NHN6 443 aaPredicted RBP20.46■□□□□ 0.87
TRIM47-207ENST00000593089 NUDT21O43809 227 aaKnown RBP20.46■□□□□ 0.87
TRIM47-207ENST00000593089 CEACAM5P06731 702 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 CCNB1P14635 433 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 MMP13P45452 471 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 GNPDA1P46926 289 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 MAZP56270 477 aaKnown RBP20.46■□□□□ 0.87
TRIM47-207ENST00000593089 PIGHQ14442 188 aaPredicted RBP20.46■□□□□ 0.87
TRIM47-207ENST00000593089 TGIF1Q15583 401 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 MARC1Q5VT66 337 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 RAET1GQ6H3X3 334 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 TMPRSS9Q7Z410 1059 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 KIAA1524Q8TCG1 905 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 GPBAR1Q8TDU6 330 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 THAP2Q9H0W7 228 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 PCDH18Q9HCL0 1135 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 KCTD5Q9NXV2 234 aa20.46■□□□□ 0.87
TRIM47-207ENST00000593089 PGLSO95336 258 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 FUCA1P04066 466 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 CTPS1P17812 591 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 SERPINB6P35237 376 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 CDH6P55285 790 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 CDK3Q00526 305 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 ZFP36L1Q07352 338 aaKnown RBP20.45■□□□□ 0.86
TRIM47-207ENST00000593089 ILF3Q12906 894 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRIM47-207ENST00000593089 KRT81Q14533 505 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 NR1I3Q14994 352 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 PHF19Q5T6S3 580 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 ARMC12Q5T9G4 340 aa20.45■□□□□ 0.86
TRIM47-207ENST00000593089 CAVIN1Q6NZI2 390 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms