RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 A0A1W2PQM1 296 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 K7ENP7 123 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 DAPK3O43293 454 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 HTRA2O43464 458 aaPredicted RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 KALRNO60229 2985 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 RECQL5O94762 991 aaPredicted RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 ITGA2BP08514 1039 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PNLIPP16233 465 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 GM2AP17900 193 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 CCKBRP32239 447 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PCK1P35558 622 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 RENBPP51606 427 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 KIAA1024LP59773 190 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 BCL2L1Q07817 233 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 DPYSQ14117 519 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 TDRD12Q587J7 1177 aaKnown RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 CFAP58Q5T655 872 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 INO80CQ6PI98 192 aaPredicted RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 DPPA4Q7L190 304 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF571Q7Z3V5 609 aaPredicted RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 RD3Q7Z3Z2 195 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 NPWQ8N729 165 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PLA2G15Q8NCC3 412 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 OR56A4Q8NGH8 313 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PCDH19Q8TAB3 1148 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 TTC9Q92623 222 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 FUBP1Q96AE4 644 aaKnown RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 NSMCE3Q96MG7 304 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF599Q96NL3 588 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 KCTD15Q96SI1 283 aaPredicted RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 KCTD5Q9NXV2 234 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 CWC15Q9P013 229 aaKnown RBP10.44□□□□□ -0.74
VPS4B-207ENST00000591519 KLQ9UEF7 1012 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PCSK1NQ9UHG2 260 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 ACSL6Q9UKU0 697 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 GPR34Q9UPC5 381 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 PCDHGA7Q9Y5G6 932 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 LRP4O75096 1905 aa10.44□□□□□ -0.74
VPS4B-207ENST00000591519 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 TMEM202A6NGA9 273 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CACNB4O00305 520 aaPredicted RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 PDE2AO00408 941 aaPredicted RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 DDX3XO00571 662 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■□□□ 11.9
VPS4B-207ENST00000591519 PRPSAP2O60256 369 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 LRCH4O75427 683 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 TNFSF15O95150 251 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 PEX11BO96011 259 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 GYPCP04921 128 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 PRKCGP05129 697 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 GLB1P16278 677 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CR2P20023 1033 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 KELP23276 732 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CASP14P31944 242 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 SCNN1BP51168 640 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 AP1S1P61966 158 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CCL7P80098 99 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CFHR1Q03591 330 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ZFP36L1Q07352 338 aaKnown RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 BOLA3Q53S33 107 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ARHGAP40Q5TG30 622 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 KCTD16Q68DU8 428 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 PNCKQ6P2M8 343 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ARHGAP36Q6ZRI8 547 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 RAB11FIP2Q7L804 512 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ZNF511Q8NB15 262 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 KYQ8NBH2 561 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 OR1E3Q8WZA6 343 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 COQ10AQ96MF6 247 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 TMEM74Q96NL1 305 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 GFM1Q96RP9 751 aaKnown RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 TRIM7Q9C029 511 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 TRIM5Q9C035 493 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ISCUQ9H1K1 167 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 LRRN3Q9H3W5 708 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 SIRPGQ9P1W8 387 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 LUC7L2Q9Y383 392 aaKnown RBP10.43□□□□□ -0.74
VPS4B-207ENST00000591519 ANKRD36A6QL64 1941 aa10.43□□□□□ -0.74
VPS4B-207ENST00000591519 A0A1W2PQJ5 194 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PMS2P1A4D2B8 440 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 D6RAR5 112 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 DFFAO00273 331 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PLD2O14939 933 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 NVLO15381 856 aaKnown RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 EFSO43281 561 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 NUDT21O43809 227 aaKnown RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 NOBOXO60393 691 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 SOCS5O75159 536 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 PCCBP05166 539 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 ELFN1P0C7U0 828 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 MYBL1P10243 752 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 GMPRP36959 345 aa10.42□□□□□ -0.74
VPS4B-207ENST00000591519 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
VPS4B-207ENST00000591519 INHBCP55103 352 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms