RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 FPGTO14772 594 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 SPOPO43791 374 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 TOP3BO95985 862 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 C6P13671 934 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 GM2AP17900 193 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 MX2P20592 715 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 XPAP23025 273 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 CDKN2BP42772 138 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 NOP2P46087 812 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 RABIFP47224 123 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 SEMG2Q02383 582 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 PPIDQ08752 370 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 IRF4Q15306 451 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 INAVAQ3KP66 663 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 CFAP58Q5T655 872 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 ERAP2Q6P179 960 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 MFSD7Q6UXD7 560 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 DPPA4Q7L190 304 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 RAB44Q7Z6P3 723 aaPredicted RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 SLCO6A1Q86UG4 719 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 OLFM3Q96PB7 478 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 NT5MQ9NPB1 228 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 LUC7LQ9NQ29 371 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 MBNL1Q9NR56 388 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 DDX56Q9NY93 547 aaKnown RBP11.26□□□□□ -0.61
SMAD4-211ENST00000590499 IMPACTQ9P2X3 320 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 COQ6Q9Y2Z9 468 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 PLXNB3Q9ULL4 1909 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 DMXL2Q8TDJ6 3036 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 ZZEF1O43149 2961 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 A0A1W2PQ67 120 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 PJA2O43164 708 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 TNFSF14O43557 240 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 FZD6O60353 706 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 SDC3O75056 442 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 PGLSO95336 258 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 TRIM16O95361 564 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 HLA-DQB2P05538 268 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ITGAVP06756 1048 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ATXN1LP0C7T5 689 aaKnown RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 CCNB1P14635 433 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 MARCKSL1P49006 195 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 LIG3P49916 1009 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 GDF10P55107 478 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 POLR2LP62875 67 aaKnown RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 IFI35P80217 286 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 WSCD2Q2TBF2 565 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 LIPIQ6XZB0 460 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 PARGQ86W56 976 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 KATNAL2Q8IYT4 538 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 SLC25A45Q8N413 288 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ACRBPQ8NEB7 543 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ARRDC2Q8TBH0 407 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ADAMTS14Q8WXS8 1223 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 KRT35Q92764 455 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 MCCC1Q96RQ3 725 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 LGMNQ99538 433 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 SEMA3CQ99985 751 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 C1QTNF7Q9BXJ2 289 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 POLR1EQ9GZS1 481 aaKnown RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 RBM22Q9NW64 420 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 B4GALT6Q9UBX8 382 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 KLF15Q9UIH9 416 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 PNMA8BQ9ULN7 279 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-211ENST00000590499 DUSP10Q9Y6W6 482 aa11.25□□□□□ -0.61
SMAD4-211ENST00000590499 ASXL3Q9C0F0 2248 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 FAM221BA6H8Z2 402 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 TOR1BO14657 336 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 APOL1O14791 398 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 HYAL3O43820 417 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PIAS2O75928 621 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 CPP00450 1065 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 CSF2P04141 144 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 TNNT1P13805 278 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 NME1P15531 152 aaKnown RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 LHCGRP22888 699 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 DGKAP23743 735 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 COL8A1P27658 744 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 VAV2P52735 878 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 YPEL5P62699 121 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 DSC2Q02487 901 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 ADCY2Q08462 1091 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 NIPAL4Q0D2K0 466 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 EIF2B5Q13144 721 aaKnown RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 LRRC14Q15048 493 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 NPNTQ6UXI9 565 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 SPOCD1Q6ZMY3 1216 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 RFX6Q8HWS3 928 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 CBARPQ8N350 705 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 EID2Q8N6I1 236 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms