RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SLC45A1Q9Y2W3 748 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 AAR2Q9Y312 384 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 NFE2L3Q9Y4A8 694 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 LSM4Q9Y4Z0 139 aaKnown RBP3.57□□□□□ -1.84
SMAD4-207ENST00000589076 A3GALT2U3KPV4 340 aa3.57□□□□□ -1.84
SMAD4-207ENST00000589076 A0A0U1RQF3 1178 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 FAM237AA0A1B0GTK4 181 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 SCAMP1O15126 338 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 KLK8O60259 260 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 IPO7O95373 1038 aaKnown RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 MMP2P08253 660 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 RARGP13631 454 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 ETFAP13804 333 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 ARSBP15848 533 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 TM4SF1P30408 202 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 DCTDP32321 178 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 SHMT1P34896 483 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 PPARGP37231 505 aaPredicted RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 PSMB10P40306 273 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 DSCR9P59020 149 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 ST3GAL1Q11201 340 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 GRIK3Q13003 919 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 AIMP2Q13155 320 aaKnown RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 CUL4AQ13619 759 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 DRAP1Q14919 205 aaPredicted RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 ESCO2Q56NI9 601 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 DCAF12L2Q5VW00 463 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 TMEM154Q6P9G4 183 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 KLHL35Q6PF15 583 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 PALB2Q86YC2 1186 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 TDRPQ86YL5 185 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 INPP5DQ92835 1189 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 FBXL8Q96CD0 374 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 PABPC5Q96DU9 382 aaKnown RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 MMABQ96EY8 250 aaPredicted RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 CMTM3Q96MX0 182 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 NCAPGQ9BPX3 1015 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 NUDT16L1Q9BRJ7 211 aaKnown RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 POLDIP3Q9BY77 421 aaKnown RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 KAT14Q9H8E8 782 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 POLR1BQ9H9Y6 1135 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 KIF9Q9HAQ2 790 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 SCPEP1Q9HB40 452 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 SIRT3Q9NTG7 399 aaPredicted RBP3.56□□□□□ -1.84
SMAD4-207ENST00000589076 ADAM18Q9Y3Q7 739 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 PCDHGB1Q9Y5G3 927 aa3.56□□□□□ -1.84
SMAD4-207ENST00000589076 A0A1W2PQF6 199 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 FRMD3A2A2Y4 597 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 DYTNA2CJ06 578 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SNAP23O00161 211 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 VILLO15195 856 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 TSPAN9O75954 239 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RGS11O94810 467 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 NDUFB4O95168 129 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF182P17025 639 aaPredicted RBP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ITGAXP20702 1163 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 GNLYP22749 145 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 CHATP28329 748 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RFX2P48378 723 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ART1P52961 327 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SELENOVP59797 346 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ZP1P60852 638 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ADORA2A-AS1P86434 159 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ROR2Q01974 943 aaKnown RBP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 CREB5Q02930 508 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ALG11Q2TAA5 492 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RILPL1Q5EBL4 403 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SGO1Q5FBB7 561 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 NUGGCQ68CJ6 796 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 LRRC8EQ6NSJ5 796 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 MON1BQ7L1V2 547 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 LINGO2Q7L985 606 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 TICAM1Q8IUC6 712 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SFTPA2Q8IWL1 248 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 MB21D2Q8IYB1 491 aaPredicted RBP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 NME8Q8N427 588 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 WDTC1Q8N5D0 677 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 PARP16Q8N5Y8 322 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 CCDC89Q8N998 374 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 BEST2Q8NFU1 509 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 WFIKKN2Q8TEU8 576 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 PHF21BQ96EK2 531 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF570Q96NI8 536 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 NEUROD6Q96NK8 337 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 WDFY2Q96P53 400 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 MSTO1Q9BUK6 570 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 FTOQ9C0B1 505 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SMARCAD1Q9H4L7 1026 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SH2D4AQ9H788 454 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 CATSPERBQ9H7T0 1116 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RRP7BPQ9NSQ0 103 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ABI3Q9P2A4 366 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 IL36RNQ9UBH0 155 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 TBC1D29Q9UFV1 150 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 ZNF215Q9UL58 517 aaPredicted RBP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RABGAP1Q9Y3P9 1069 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
SMAD4-207ENST00000589076 RAI2Q9Y5P3 530 aa3.55□□□□□ -1.84
SMAD4-207ENST00000589076 MS4A18H0YCH9 400 aa3.54□□□□□ -1.84
SMAD4-207ENST00000589076 IFNL4K9M1U5 179 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms