RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 PPARDQ03181 441 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 GBE1Q04446 702 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 GALNT2Q10471 571 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 SLC10A2Q12908 348 aaPredicted RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 TRAF2Q12933 501 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 PAFAH1B3Q15102 231 aaKnown RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 PDK2Q15119 407 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CDKN3Q16667 212 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 ENPP7Q6UWV6 458 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 LIPIQ6XZB0 460 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 DPPA4Q7L190 304 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 PQLC3Q8N755 202 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 CCNYQ8ND76 341 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 KIF18AQ8NI77 898 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 IL12RB2Q99665 862 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 SEMA3CQ99985 751 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 MGME1Q9BQP7 344 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 APOOQ9BUR5 198 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 SLC13A1Q9BZW2 595 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 RBM22Q9NW64 420 aaKnown RBP eCLIP11.59□□□□□ -0.55
RFX1-204ENST00000588885 RCOR3Q9P2K3 495 aaPredicted RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 SPASTQ9UBP0 616 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 APOBEC3BQ9UH17 382 aaKnown RBP11.59□□□□□ -0.55
RFX1-204ENST00000588885 LCMT1Q9UIC8 334 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 JRKLQ9Y4A0 524 aa11.59□□□□□ -0.55
RFX1-204ENST00000588885 APC2O95996 2303 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 LY6G6EA0A0G2JKS1 128 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 EIF4E1BA6NMX2 242 aaKnown RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 YY2O15391 372 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 HTRA2O43464 458 aaPredicted RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 CKMT1AP12532 417 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 TSHRP16473 764 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 GM2AP17900 193 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 HTR1BP28222 390 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 CTNNA1P35221 906 aaKnown RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 HSPA9P38646 679 aaKnown RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 SLC1A1P43005 524 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 SRP54P61011 504 aaKnown RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 INSM1Q01101 510 aaPredicted RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 DSC2Q02487 901 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 LLGL1Q15334 1064 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 RPS6KA1Q15418 735 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 ALG11Q2TAA5 492 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 PAPD7Q5XG87 772 aaKnown RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 KCTD16Q68DU8 428 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 CRTC1Q6UUV9 634 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 MACC1Q6ZN28 852 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 B4GALNT4Q76KP1 1039 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 PELI3Q8N2H9 469 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 BTN2A2Q8WVV5 523 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 ALG3Q92685 438 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 HES6Q96HZ4 224 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 ZNF670Q9BS34 389 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 LRRC61Q9BV99 259 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 CLPBQ9H078 707 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 ABCG4Q9H172 646 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 SUDS3Q9H7L9 328 aaPredicted RBP11.58□□□□□ -0.56
RFX1-204ENST00000588885 SIRPGQ9P1W8 387 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 GULP1Q9UBP9 304 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 MOSPD1Q9UJG1 213 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 RAXQ9Y2V3 346 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 RAI2Q9Y5P3 530 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 CSNK1G3Q9Y6M4 447 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 U3KQA8 63 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 ZFYVE26Q68DK2 2539 aa11.58□□□□□ -0.56
RFX1-204ENST00000588885 NBEAQ8NFP9 2946 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 GOLGA6CA6NDK9 693 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
RFX1-204ENST00000588885 MATN3O15232 486 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 PSTPIP1O43586 416 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 URI1O94763 535 aaPredicted RBP11.57□□□□□ -0.56
RFX1-204ENST00000588885 PGLSO95336 258 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 MT-CO3P00414 261 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 JCHAINP01591 159 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 KRT1P04264 644 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 ANXA6P08133 673 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 PDHA1P08559 390 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 ALPIP09923 528 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 GOLGA6DP0CG33 693 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 CDK4P11802 303 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 CTSEP14091 401 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 VIPR1P32241 457 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 ETV3P41162 512 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 PEX5P50542 639 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 E2F1Q01094 437 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 ILKQ13418 452 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 IHHQ14623 411 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 NFATC4Q14934 902 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 CNGA3Q16281 694 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 ARMC12Q5T9G4 340 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 GUSBP11Q6P575 273 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 RFLNAQ6ZTI6 216 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 EFL1Q7Z2Z2 1120 aaKnown RBP11.57□□□□□ -0.56
RFX1-204ENST00000588885 HSD11B1LQ7Z5J1 315 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 TSPAN33Q86UF1 283 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 LRRC49Q8IUZ0 686 aa11.57□□□□□ -0.56
RFX1-204ENST00000588885 TEX26Q8N6G2 289 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms