RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 RBM15Q96T37 977 aaKnown RBP eCLIP20.22■□□□□ 0.83
ATG4D-208ENST00000588667 TM9SF3Q9HD45 589 aa20.22■□□□□ 0.83
ATG4D-208ENST00000588667 CEP250Q9BV73 2442 aa20.22■□□□□ 0.83
ATG4D-208ENST00000588667 ADAMTS9Q9P2N4 1935 aa20.22■□□□□ 0.83
ATG4D-208ENST00000588667 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 PDHA1P08559 390 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 NFKB1P19838 968 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 AFF3P51826 1226 aaKnown RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 RPL26P61254 145 aaKnown RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 FAM193AP78312 1265 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 MORF4L2Q15014 288 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 TCEAL6Q6IPX3 200 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 HIBCHQ6NVY1 386 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 PRR23CQ6ZRP0 262 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 NDUFAF2Q8N183 169 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 PIH1D2Q8WWB5 315 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 TCEAL3Q969E4 200 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 SERAC1Q96JX3 654 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 SLC6A18Q96N87 628 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 WRAP53Q9BUR4 548 aaKnown RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 C1QTNF2Q9BXJ5 285 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 NUSAP1Q9BXS6 441 aaKnown RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 SLC17A9Q9BYT1 436 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 FOXP3Q9BZS1 431 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 VIPAS39Q9H9C1 493 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 CAPN10Q9HC96 672 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 SLC6A14Q9UN76 642 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 RPL26L1Q9UNX3 145 aaKnown RBP20.21■□□□□ 0.83
ATG4D-208ENST00000588667 CHKBQ9Y259 395 aa20.21■□□□□ 0.83
ATG4D-208ENST00000588667 C5orf60A6NFR6 353 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 IGLON5A6NGN9 336 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SMAPO00193 183 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 MAP2K7O14733 419 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 TP73O15350 636 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SLC31A1O15431 190 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 GCATO75600 419 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 GRIA4P48058 902 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SF3A2Q15428 464 aaKnown RBP20.2■□□□□ 0.82
ATG4D-208ENST00000588667 ITPRIPL1Q6GPH6 555 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 CEP128Q6ZU80 1094 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 USP45Q70EL2 814 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 DPPA4Q7L190 304 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 ASB12Q8WXK4 309 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 KLK6Q92876 244 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SPATA13Q96N96 652 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 FCRL5Q96RD9 977 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 MCCC1Q96RQ3 725 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-208ENST00000588667 GBA3Q9H227 469 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 ACBD3Q9H3P7 528 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 RSPH14Q9UHP6 348 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SHOC2Q9UQ13 582 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 PPIL1Q9Y3C6 166 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 CFAP54Q96N23 3096 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 PRAMEF26H0Y7S4 382 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 MMP20O60882 483 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 PRLP01236 227 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 HNRNPA2B1P22626 353 aaKnown RBP20.2■□□□□ 0.82
ATG4D-208ENST00000588667 EPHB1P54762 984 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 DHX9Q08211 1270 aaKnown RBP20.2■□□□□ 0.82
ATG4D-208ENST00000588667 RALGDSQ12967 914 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SGCGQ13326 291 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 FGL2Q14314 439 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SLMAPQ14BN4 828 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 TEAD4Q15561 434 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 TMC3Q7Z5M5 1100 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SPATA22Q8NHS9 363 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 SCRN2Q96FV2 425 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 AASDHPPTQ9NRN7 309 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 B4GALT6Q9UBX8 382 aa20.2■□□□□ 0.82
ATG4D-208ENST00000588667 LNP1A1A4G5 178 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 OPHN1O60890 802 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 TM7SF2O76062 418 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
ATG4D-208ENST00000588667 AKT2P31751 481 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 IRX4P78413 519 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 ANKRD20A2Q5SQ80 823 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 RNASEH2BQ5TBB1 312 aaKnown RBP20.19■□□□□ 0.82
ATG4D-208ENST00000588667 ANKRD20A1Q5TYW2 823 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 ANKRD20A3Q5VUR7 823 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 HOOK3Q86VS8 718 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 PPIL6Q8IXY8 311 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 TMEM145Q8NBT3 493 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 ADGRE3Q9BY15 652 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 CABIN1Q9Y6J0 2220 aa20.19■□□□□ 0.82
ATG4D-208ENST00000588667 A0A0J9YYE9 177 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 PPFIA2O75334 1257 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 SASH3O75995 380 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 PAK4O96013 591 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-208ENST00000588667 TRBC1P01850 177 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 ELFN1P0C7U0 828 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 CYP2A6P11509 494 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-208ENST00000588667 C6P13671 934 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 HOXD11P31277 338 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-208ENST00000588667 VIPR1P32241 457 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 LIG3P49916 1009 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 BASP1P80723 227 aaKnown RBP20.18■□□□□ 0.82
ATG4D-208ENST00000588667 SEMG2Q02383 582 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 ARHGEF18Q6ZSZ5 1173 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 DENND6BQ8NEG7 585 aa20.18■□□□□ 0.82
ATG4D-208ENST00000588667 LPCAT1Q8NF37 534 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms