RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PHPT1Q9NRX4 125 aaPredicted RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 FOXJ2Q9P0K8 574 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 PCDHGC4Q9Y5F7 938 aa16.83■□□□□ 0.28
LINC01842-201ENST00000588275 HEMK1Q9Y5R4 338 aaPredicted RBP16.83■□□□□ 0.28
LINC01842-201ENST00000588275 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 RHPN2P1A8MT19 583 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 NUDT21O43809 227 aaKnown RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 HOXC4P09017 264 aaPredicted RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ALDH4A1P30038 563 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 TRIM23P36406 574 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 GNPDA1P46926 289 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 OR1D5P58170 312 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ZFP36L1Q07352 338 aaKnown RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ILF3Q12906 894 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ASIC2Q16515 512 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 IRF2BP2Q7Z5L9 587 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 SLITRK4Q8IW52 837 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 EXD3Q8N9H8 876 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ZDHHC1Q8WTX9 485 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 TMEM159Q96B96 161 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ZNF653Q96CK0 615 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 PSKH2Q96QS6 385 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 GSDMCQ9BYG8 508 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ZWILCHQ9H900 591 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 SPATS2LQ9NUQ6 558 aaKnown RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 CWC15Q9P013 229 aaKnown RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 AKAP7Q9P0M2 348 aaPredicted RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 MYO1AQ9UBC5 1043 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
LINC01842-201ENST00000588275 ACSL6Q9UKU0 697 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 PCDHB11Q9Y5F2 797 aa16.82■□□□□ 0.28
LINC01842-201ENST00000588275 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 LRRC53A6NM62 1247 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 CCNB1P14635 433 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 AK4P27144 223 aaPredicted RBP16.81■□□□□ 0.28
LINC01842-201ENST00000588275 VIPR1P32241 457 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 ETV3P41162 512 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 C16orf72Q14CZ0 275 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 SMTNL2Q2TAL5 461 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 RAET1GQ6H3X3 334 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 DOK6Q6PKX4 331 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 SLC30A9Q6PML9 568 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 CYP4V2Q6ZWL3 525 aaPredicted RBP16.81■□□□□ 0.28
LINC01842-201ENST00000588275 APTXQ7Z2E3 356 aaKnown RBP16.81■□□□□ 0.28
LINC01842-201ENST00000588275 PIM3Q86V86 326 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 ZSCAN1Q8NBB4 408 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 RCBTB1Q8NDN9 531 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 JPH3Q8WXH2 748 aaPredicted RBP16.81■□□□□ 0.28
LINC01842-201ENST00000588275 HSPH1Q92598 858 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 COQ10AQ96MF6 247 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 SYT11Q9BT88 431 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 TRIM4Q9C037 500 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 CLMPQ9H6B4 373 aa16.81■□□□□ 0.28
LINC01842-201ENST00000588275 MYO18BQ8IUG5 2567 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 C9orf172C9J069 976 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 H3BRJ5 948 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 LRCH4O75427 683 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 HEXIM1O94992 359 aaKnown RBP16.8■□□□□ 0.28
LINC01842-201ENST00000588275 CPNE6O95741 557 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 CYP2A6P11509 494 aaPredicted RBP16.8■□□□□ 0.28
LINC01842-201ENST00000588275 NFKBIAP25963 317 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 ARL4AP40617 200 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 PPM1FP49593 454 aaPredicted RBP16.8■□□□□ 0.28
LINC01842-201ENST00000588275 MAXP61244 160 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 B4GALNT1Q00973 533 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 KCNC4Q03721 635 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 DPYSQ14117 519 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 NCAPHQ15003 741 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 LINC00303Q3SY05 128 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 TMEM164Q5U3C3 297 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 NRROSQ86YC3 692 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 LZTR1Q8N653 840 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 GPBAR1Q8TDU6 330 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 PATE1Q8WXA2 126 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 NUDT22Q9BRQ3 303 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 HAUS4Q9H6D7 363 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 TAAR2Q9P1P5 351 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 SUFUQ9UMX1 484 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 PCDHGA4Q9Y5G9 962 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 SCINQ9Y6U3 715 aa16.8■□□□□ 0.28
LINC01842-201ENST00000588275 LRRC10BA6NIK2 292 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 B4GAT1O43505 415 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 SOCS5O75159 536 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 ECEL1O95672 775 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 FTLP02792 175 aaPredicted RBP16.79■□□□□ 0.28
LINC01842-201ENST00000588275 FGF1P05230 155 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 CEACAM5P06731 702 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 AMPD1P23109 780 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 HSPA9P38646 679 aaKnown RBP16.79■□□□□ 0.28
LINC01842-201ENST00000588275 POLD2P49005 469 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 ZNF135P52742 658 aaPredicted RBP16.79■□□□□ 0.28
LINC01842-201ENST00000588275 CYP4F2P78329 520 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 CDK3Q00526 305 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 NFKB2Q00653 900 aa16.79■□□□□ 0.28
LINC01842-201ENST00000588275 TRAF2Q12933 501 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms